Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LA_1896 | LA_1898 | LA_1896 | LA_1898 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Succinate:quinone oxidoreductase (SQR)-like protein. | 0.999 |
LA_1896 | argH | LA_1896 | LA_2076 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Argininosuccinate lyase. | 0.826 |
LA_1896 | fumC | LA_1896 | LA_0185 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.974 |
LA_1896 | gltA | LA_1896 | LA_0671 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Citrate synthase; Belongs to the citrate synthase family. | 0.856 |
LA_1896 | gltA-2 | LA_1896 | LA_0790 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Citrate synthase; Belongs to the citrate synthase family. | 0.856 |
LA_1896 | mdh | LA_1896 | LA_2139 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.843 |
LA_1896 | sdhA | LA_1896 | LA_1897 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Succinate dehydrogenase flavoprotein subunit. | 0.999 |
LA_1896 | sucD | LA_1896 | LA_1101 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.989 |
LA_1898 | LA_1896 | LA_1898 | LA_1896 | Succinate:quinone oxidoreductase (SQR)-like protein. | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | 0.999 |
LA_1898 | argH | LA_1898 | LA_2076 | Succinate:quinone oxidoreductase (SQR)-like protein. | Argininosuccinate lyase. | 0.800 |
LA_1898 | fumC | LA_1898 | LA_0185 | Succinate:quinone oxidoreductase (SQR)-like protein. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.900 |
LA_1898 | sdhA | LA_1898 | LA_1897 | Succinate:quinone oxidoreductase (SQR)-like protein. | Succinate dehydrogenase flavoprotein subunit. | 0.999 |
LA_1898 | sucD | LA_1898 | LA_1101 | Succinate:quinone oxidoreductase (SQR)-like protein. | succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.919 |
argH | LA_1896 | LA_2076 | LA_1896 | Argininosuccinate lyase. | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | 0.826 |
argH | LA_1898 | LA_2076 | LA_1898 | Argininosuccinate lyase. | Succinate:quinone oxidoreductase (SQR)-like protein. | 0.800 |
argH | fumC | LA_2076 | LA_0185 | Argininosuccinate lyase. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.826 |
argH | gltA | LA_2076 | LA_0671 | Argininosuccinate lyase. | Citrate synthase; Belongs to the citrate synthase family. | 0.826 |
argH | gltA-2 | LA_2076 | LA_0790 | Argininosuccinate lyase. | Citrate synthase; Belongs to the citrate synthase family. | 0.826 |
argH | mdh | LA_2076 | LA_2139 | Argininosuccinate lyase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.853 |
argH | sdhA | LA_2076 | LA_1897 | Argininosuccinate lyase. | Succinate dehydrogenase flavoprotein subunit. | 0.820 |
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