STRINGSTRING
hrcC hrcC hrcJ hrcJ hrcT hrcT hrcS hrcS hrcV hrcV hrcR hrcR hrcN hrcN hrcU hrcU xcsC xcsC hrcQ hrcQ hpa2 hpa2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrcCHrcC protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (605 aa)    
Predicted Functional Partners:
hrcJ
HrcJ protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.993
hrcT
HrpB8 protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.987
hrcS
HrcS protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.977
hrcV
HrcV; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.963
hrcR
HrcR protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.962
hrcN
HrpB6 protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.914
hrcU
HrcU protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
 0.879
xcsC
Type II secretion system protein C; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.847
hrcQ
HrcQ protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.842
hpa2
Hpa2 protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.835
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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