Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CT0163 | CT1088 | CT0163 | CT1088 | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | 0.964 |
| CT0163 | accC | CT0163 | CT0157 | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.917 |
| CT0163 | ackA | CT0163 | CT1525 | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.494 |
| CT0163 | acs | CT0163 | CT1652 | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.943 |
| CT0163 | aldA | CT0163 | CT1886 | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | Aldehyde dehydrogenase; Identified by similarity to EGAD:4728; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.402 |
| CT0163 | gltA | CT0163 | CT1834 | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | Citrate synthase; Identified by similarity to EGAD:20399; similarity to EGAD:77210; match to protein family HMM PF00285; match to protein family HMM TIGR01798; Belongs to the citrate synthase family. | 0.932 |
| CT0163 | leuA-1 | CT0163 | CT0612 | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | 2-isopropylmalate synthase; Identified by similarity to EGAD:32071; match to protein family HMM PF00682; match to protein family HMM TIGR00977; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.932 |
| CT0163 | leuA-2 | CT0163 | CT2107 | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.932 |
| CT0163 | nifJ | CT0163 | CT1628 | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | Pyruvate flavodoxin/ferrodoxin oxidoreductase; Identified by similarity to EGAD:9985; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02775; match to protein family HMM TIGR02176. | 0.999 |
| CT0163 | nifV | CT0163 | CT1528 | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | Homocitrate synthase; Identified by similarity to EGAD:10481; match to protein family HMM PF00682; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.932 |
| CT1088 | CT0163 | CT1088 | CT0163 | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | Alpha oxoglutarate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to EGAD:144640; match to protein family HMM PF01558; match to protein family HMM PF01855. | 0.964 |
| CT1088 | accC | CT1088 | CT0157 | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.936 |
| CT1088 | ackA | CT1088 | CT1525 | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.559 |
| CT1088 | acs | CT1088 | CT1652 | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.975 |
| CT1088 | aldA | CT1088 | CT1886 | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | Aldehyde dehydrogenase; Identified by similarity to EGAD:4728; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.782 |
| CT1088 | gltA | CT1088 | CT1834 | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | Citrate synthase; Identified by similarity to EGAD:20399; similarity to EGAD:77210; match to protein family HMM PF00285; match to protein family HMM TIGR01798; Belongs to the citrate synthase family. | 0.950 |
| CT1088 | leuA-1 | CT1088 | CT0612 | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | 2-isopropylmalate synthase; Identified by similarity to EGAD:32071; match to protein family HMM PF00682; match to protein family HMM TIGR00977; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.438 |
| CT1088 | leuA-2 | CT1088 | CT2107 | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.438 |
| CT1088 | nifJ | CT1088 | CT1628 | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | Pyruvate flavodoxin/ferrodoxin oxidoreductase; Identified by similarity to EGAD:9985; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02775; match to protein family HMM TIGR02176. | 0.980 |
| CT1088 | nifV | CT1088 | CT1528 | Citrate lyase, subunit2; Identified by similarity to GP:4107343; match to protein family HMM PF00549; match to protein family HMM PF02629. | Homocitrate synthase; Identified by similarity to EGAD:10481; match to protein family HMM PF00682; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.438 |
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