node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Noca_2388 | Noca_2533 | Noca_2388 | Noca_2533 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ccr:CC1992 preprotein translocase, YajC subunit. | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.975 |
Noca_2388 | Noca_4697 | Noca_2388 | Noca_4697 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ccr:CC1992 preprotein translocase, YajC subunit. | PFAM: 60 kDa inner membrane insertion protein; KEGG: pac:PPA2350 conserved membrane protein. | 0.928 |
Noca_2388 | ffh | Noca_2388 | Noca_3266 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ccr:CC1992 preprotein translocase, YajC subunit. | Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.970 |
Noca_2388 | ftsY | Noca_2388 | Noca_3270 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ccr:CC1992 preprotein translocase, YajC subunit. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.970 |
Noca_2388 | secA | Noca_2388 | Noca_1440 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ccr:CC1992 preprotein translocase, YajC subunit. | Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.969 |
Noca_2388 | secE | Noca_2388 | Noca_0694 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ccr:CC1992 preprotein translocase, YajC subunit. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.980 |
Noca_2388 | secY | Noca_2388 | Noca_3885 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ccr:CC1992 preprotein translocase, YajC subunit. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.972 |
Noca_2533 | Noca_2388 | Noca_2533 | Noca_2388 | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ccr:CC1992 preprotein translocase, YajC subunit. | 0.975 |
Noca_2533 | Noca_4697 | Noca_2533 | Noca_4697 | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | PFAM: 60 kDa inner membrane insertion protein; KEGG: pac:PPA2350 conserved membrane protein. | 0.985 |
Noca_2533 | ffh | Noca_2533 | Noca_3266 | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.966 |
Noca_2533 | ftsY | Noca_2533 | Noca_3270 | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.980 |
Noca_2533 | secA | Noca_2533 | Noca_1440 | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.992 |
Noca_2533 | secE | Noca_2533 | Noca_0694 | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.999 |
Noca_2533 | secY | Noca_2533 | Noca_3885 | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.997 |
Noca_4697 | Noca_2388 | Noca_4697 | Noca_2388 | PFAM: 60 kDa inner membrane insertion protein; KEGG: pac:PPA2350 conserved membrane protein. | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ccr:CC1992 preprotein translocase, YajC subunit. | 0.928 |
Noca_4697 | Noca_2533 | Noca_4697 | Noca_2533 | PFAM: 60 kDa inner membrane insertion protein; KEGG: pac:PPA2350 conserved membrane protein. | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.985 |
Noca_4697 | ffh | Noca_4697 | Noca_3266 | PFAM: 60 kDa inner membrane insertion protein; KEGG: pac:PPA2350 conserved membrane protein. | Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.955 |
Noca_4697 | ftsY | Noca_4697 | Noca_3270 | PFAM: 60 kDa inner membrane insertion protein; KEGG: pac:PPA2350 conserved membrane protein. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.951 |
Noca_4697 | rpoB | Noca_4697 | Noca_0711 | PFAM: 60 kDa inner membrane insertion protein; KEGG: pac:PPA2350 conserved membrane protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.404 |
Noca_4697 | secA | Noca_4697 | Noca_1440 | PFAM: 60 kDa inner membrane insertion protein; KEGG: pac:PPA2350 conserved membrane protein. | Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.971 |