node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Noca_1201 | miaA | Noca_1201 | Noca_3843 | PFAM: conserved hypothetical protein 730; KEGG: sco:SCO5140 hypothetical protein; Belongs to the LOG family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.709 |
Noca_1201 | miaB | Noca_1201 | Noca_3847 | PFAM: conserved hypothetical protein 730; KEGG: sco:SCO5140 hypothetical protein; Belongs to the LOG family. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.699 |
Noca_2408 | Noca_2443 | Noca_2408 | Noca_2443 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 conserved hypothetical Sun-family protein SCL6.29c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.589 |
Noca_2408 | miaA | Noca_2408 | Noca_3843 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.610 |
Noca_2443 | Noca_2408 | Noca_2443 | Noca_2408 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 conserved hypothetical Sun-family protein SCL6.29c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.589 |
Noca_2443 | dapF | Noca_2443 | Noca_3841 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 conserved hypothetical Sun-family protein SCL6.29c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.700 |
Noca_2443 | miaA | Noca_2443 | Noca_3843 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 conserved hypothetical Sun-family protein SCL6.29c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.630 |
Noca_2443 | miaB | Noca_2443 | Noca_3847 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 conserved hypothetical Sun-family protein SCL6.29c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.676 |
Noca_2443 | nnrD | Noca_2443 | Noca_0899 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 conserved hypothetical Sun-family protein SCL6.29c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.675 |
Noca_2443 | pheT | Noca_2443 | Noca_2466 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 conserved hypothetical Sun-family protein SCL6.29c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: sma:SAV6743 putative phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.969 |
Noca_3840 | Noca_3842 | Noca_3840 | Noca_3842 | PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: tfu:Tfu_0275 putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | KEGG: mmc:Mmcs_0215 bifunctional deaminase-reductase-like protein. | 0.615 |
Noca_3840 | dapF | Noca_3840 | Noca_3841 | PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: tfu:Tfu_0275 putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.630 |
Noca_3840 | miaA | Noca_3840 | Noca_3843 | PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: tfu:Tfu_0275 putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.620 |
Noca_3842 | Noca_3840 | Noca_3842 | Noca_3840 | KEGG: mmc:Mmcs_0215 bifunctional deaminase-reductase-like protein. | PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: tfu:Tfu_0275 putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.615 |
Noca_3842 | dapF | Noca_3842 | Noca_3841 | KEGG: mmc:Mmcs_0215 bifunctional deaminase-reductase-like protein. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.774 |
Noca_3842 | miaA | Noca_3842 | Noca_3843 | KEGG: mmc:Mmcs_0215 bifunctional deaminase-reductase-like protein. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.804 |
dapF | Noca_2443 | Noca_3841 | Noca_2443 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 conserved hypothetical Sun-family protein SCL6.29c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.700 |
dapF | Noca_3840 | Noca_3841 | Noca_3840 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: tfu:Tfu_0275 putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.630 |
dapF | Noca_3842 | Noca_3841 | Noca_3842 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | KEGG: mmc:Mmcs_0215 bifunctional deaminase-reductase-like protein. | 0.774 |
dapF | hflX | Noca_3841 | Noca_3837 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.833 |