STRINGSTRING
speA speA speB speB cstC cstC adiA adiA argH argH tpx tpx yaeC yaeC yqgB yqgB yajG yajG malM malM insA-52 insA-52
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
speABiosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (668 aa)    
Predicted Functional Partners:
speB
Agmatinase; Catalyzes the formation of putrescine from agmatine. Belongs to the arginase family. Agmatinase subfamily.
 
 
 0.968
cstC
Arginine N-succinyltransferase; Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine.
  
  
  0.913
adiA
Biodegradative arginine decarboxylase; Code: E; COG: COG1982.
     
 0.909
argH
Argininosuccinate lyase; Code: E; COG: COG0165.
     
 0.838
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
      
 0.802
yaeC
Putative lipoprotein; Code: M; COG: COG1464.
   
  
 0.787
yqgB
Conserved hypothetical protein.
       0.781
yajG
Putative polymerase/proteinase; Code: M; COG: COG3056.
      
 0.719
malM
Periplasmic protein of mal regulon; Similar to Escherichia coli K12 conserved hypothetical protein gi: 1790471 (443 aa). BLAST with identity of 98% in 441 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct.
      
 0.715
insA-52
IS1 ORF1; Code: L; COG: COG3677.
       0.686
Your Current Organism:
Shigella flexneri
NCBI taxonomy Id: 198214
Other names: S. flexneri 2a str. 301, Shigella flexneri 2a str. 301, Shigella flexneri serotype 2a str. 301
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