STRINGSTRING
Cthe_0624 Cthe_0624 Cthe_0271 Cthe_0271 Cthe_0405 Cthe_0405 Cthe_0275 Cthe_0275 cipA cipA xghA xghA Cthe_2989 Cthe_2989 Cthe_1838 Cthe_1838 Cthe_0071 Cthe_0071 bglA bglA Cthe_1428 Cthe_1428
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Cthe_0624Glycoside hydrolase family 9; KEGG: cce:Ccel_0429 PKD domain containing protein; PFAM: glycoside hydrolase family 9; Dockerin type 1; PKD domain containing protein; SMART: PKD domain containing protein. (1601 aa)    
Predicted Functional Partners:
Cthe_0271
PFAM: type 3a cellulose-binding domain protein; KEGG: ate:Athe_1860 glycoside hydrolase family 48.
 
    0.873
Cthe_0405
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: csc:Csac_1078 cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.831
Cthe_0275
PFAM: glycosyltransferase 36; carbohydrate binding; glycosyltransferase 36 associated; KEGG: cce:Ccel_2109 glycosyltransferase 36.
  
 
 0.827
cipA
Cellulosome anchoring protein cohesin region; Acts as a scaffolding protein in the cellulosome. It promotes binding of cellulose to the catalytic domains of the cellulolytic enzymes.
  
  
 0.775
xghA
Dockerin type 1; Hydrolyzes the glucosidic bonds of unbranched Glc residues in tamarind seed xyloglucan, producing XXXG, XLXG, XXLG and XLLG. Has low activity on carboxymethylcellulose, lichenan,hydroxyethylcellulose and glucuronoxylan, and no activity on xylan, polygalaturonic acid, wheat arabinoxylan, rhamnogalacturan, curdlan, laminarin, galactomannan, galactan, arabinan and pachyman or amorphous cellulose (By similarity).
  
0.751
Cthe_2989
PFAM: glycosyltransferase 36; KEGG: tnp:Tnap_0603 glycosyltransferase 36.
  
  
 0.735
Cthe_1838
Glycoside hydrolase family 10; KEGG: cpy:Cphy_0624 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; Dockerin type 1; SMART: glycoside hydrolase family 10.
  
  
 0.724
Cthe_0071
KEGG: cpy:Cphy_3368 cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase family 48; type 3a cellulose-binding domain protein.
    0.692
bglA
TIGRFAM: beta-galactosidase; KEGG: dtu:Dtur_1799 beta-galactosidase; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.678
Cthe_1428
Beta-glucosidase; KEGG: hor:Hore_04820 beta-glucosidase; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.672
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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