STRINGSTRING
Sde_0573 Sde_0573 pul13A pul13A Sde_0563 Sde_0563 Sde_0988 Sde_0988 glgB glgB Sde_0589 Sde_0589 Sde_0601 Sde_0601 Sde_0989 Sde_0989 Sde_0986 Sde_0986 Sde_2938 Sde_2938 gly97A gly97A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Sde_0573Putative a-amylase. (566 aa)    
Predicted Functional Partners:
pul13A
Putative pullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 0.991
Sde_0563
Putative a-amylase.
 
  
  0.972
Sde_0988
Putative isoamylase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.956
glgB
Putative 1,4-a-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.937
Sde_0589
Putative retaining a-glycosidase; Amylase-related.
  
  
 
0.928
Sde_0601
Putative retaining a-glycosidase.
 
  
 
0.925
Sde_0989
Putative a-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.924
Sde_0986
4-a-glucanotransferase-like protein.
  
 
 0.919
Sde_2938
Putative amylase.
  
  
  0.917
gly97A
A-glucosidase-like protein.
  
  
  0.913
Your Current Organism:
Saccharophagus degradans
NCBI taxonomy Id: 203122
Other names: Microbulbifer degradans 2-40, Microbulbifer sp. 2-40, S. degradans 2-40, Saccharophagus degradans 2-40, Saccharophagus degradans ATCC 43961, Saccharophagus degradans str. 2-40, Saccharophagus degradans strain 2-40, bacterium 2-40
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