STRINGSTRING
Tery_4912 Tery_4912 Tery_4913 Tery_4913 Tery_0206 Tery_0206 Tery_0672 Tery_0672 Tery_1193 Tery_1193 Tery_3789 Tery_3789 Tery_4114 Tery_4114 Tery_4487 Tery_4487 Tery_0347 Tery_0347 Tery_3847 Tery_3847 Tery_2475 Tery_2475
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4912KEGG: ava:Ava_2084 serine/threonine protein kinase. (58 aa)    
Predicted Functional Partners:
Tery_4913
KEGG: ava:Ava_0153 serine/threonine protein kinase.
 
     0.850
Tery_0206
KEGG: ava:Ava_2889 hypothetical protein.
  
     0.775
Tery_0672
KEGG: ana:alr4308 hypothetical protein.
  
     0.775
Tery_1193
KEGG: ava:Ava_1259 hypothetical protein.
  
     0.775
Tery_3789
KEGG: ana:all0333 hypothetical protein.
  
     0.775
Tery_4114
PFAM: Mo-dependent nitrogenase-like; KEGG: ava:Ava_1587 Mo-dependent nitrogenase-like.
  
     0.775
Tery_4487
TIGRFAM: conserved hypothetical protein; KEGG: ava:Ava_3680 hypothetical protein.
  
     0.775
Tery_0347
TIGRFAM: CO2 hydration protein; KEGG: ana:alr0871 hypothetical protein.
  
     0.774
Tery_3847
KEGG: ava:Ava_4468 transferase hexapeptide repeat.
  
     0.773
Tery_2475
KEGG: ava:Ava_0935 hypothetical protein.
  
     0.771
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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