STRINGSTRING
ABF41311.1 ABF41311.1 ABF43330.1 ABF43330.1 ABF43329.1 ABF43329.1 ABF43048.1 ABF43048.1 rpoB rpoB ABF41719.1 ABF41719.1 ABF41579.1 ABF41579.1 ABF39470.1 ABF39470.1 ABF41312.1 ABF41312.1 ABF43059.1 ABF43059.1 ABF42504.1 ABF42504.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABF41311.1Serine/threonine protein kinase with TPR repeats. (841 aa)    
Predicted Functional Partners:
ABF43330.1
Protein serine/threonine phosphatase.
 
 
 0.842
ABF43329.1
FHA domain containing protein.
 
 
 0.693
ABF43048.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.674
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.587
ABF41719.1
Serine phosphatase.
 
 
 0.583
ABF41579.1
Serine/threonine protein kinase.
 
  
0.536
ABF39470.1
Beta-ketoacyl synthase.
  
 
 0.524
ABF41312.1
Conserved hypothetical protein.
       0.514
ABF43059.1
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.463
ABF42504.1
Multi-sensor signal transduction histidine kinase.
  
  
 0.434
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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