Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABF40638.1 | ABF40647.1 | Acid345_1636 | Acid345_1645 | Flagellar motor switch protein FliM. | Flagellar basal body FlaE. | 0.996 |
ABF40638.1 | ABF40652.1 | Acid345_1636 | Acid345_1650 | Flagellar motor switch protein FliM. | Flagellar biosynthesis/type III secretory pathway protein-like protein. | 0.983 |
ABF40638.1 | ABF40653.1 | Acid345_1636 | Acid345_1651 | Flagellar motor switch protein FliM. | Flagellar motor switch protein FliG. | 0.999 |
ABF40638.1 | ABF40657.1 | Acid345_1636 | Acid345_1655 | Flagellar motor switch protein FliM. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.989 |
ABF40638.1 | ABF41318.1 | Acid345_1636 | Acid345_2317 | Flagellar motor switch protein FliM. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.439 |
ABF40638.1 | ABF41413.1 | Acid345_1636 | Acid345_2412 | Flagellar motor switch protein FliM. | Histidine kinase. | 0.840 |
ABF40638.1 | ABF42932.1 | Acid345_1636 | Acid345_3932 | Flagellar motor switch protein FliM. | Response regulator receiver modulated serine phosphatase. | 0.853 |
ABF40638.1 | ABF43059.1 | Acid345_1636 | Acid345_4059 | Flagellar motor switch protein FliM. | PAS/PAC sensor hybrid histidine kinase. | 0.855 |
ABF40647.1 | ABF40638.1 | Acid345_1645 | Acid345_1636 | Flagellar basal body FlaE. | Flagellar motor switch protein FliM. | 0.996 |
ABF40647.1 | ABF40652.1 | Acid345_1645 | Acid345_1650 | Flagellar basal body FlaE. | Flagellar biosynthesis/type III secretory pathway protein-like protein. | 0.961 |
ABF40647.1 | ABF40653.1 | Acid345_1645 | Acid345_1651 | Flagellar basal body FlaE. | Flagellar motor switch protein FliG. | 0.994 |
ABF40647.1 | ABF40657.1 | Acid345_1645 | Acid345_1655 | Flagellar basal body FlaE. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.996 |
ABF40647.1 | ABF40766.1 | Acid345_1645 | Acid345_1765 | Flagellar basal body FlaE. | Anti-sigma-factor antagonist. | 0.570 |
ABF40647.1 | ABF41318.1 | Acid345_1645 | Acid345_2317 | Flagellar basal body FlaE. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.513 |
ABF40647.1 | ABF41413.1 | Acid345_1645 | Acid345_2412 | Flagellar basal body FlaE. | Histidine kinase. | 0.845 |
ABF40647.1 | ABF41517.1 | Acid345_1645 | Acid345_2516 | Flagellar basal body FlaE. | Anti-sigma-factor antagonist. | 0.570 |
ABF40647.1 | ABF42932.1 | Acid345_1645 | Acid345_3932 | Flagellar basal body FlaE. | Response regulator receiver modulated serine phosphatase. | 0.825 |
ABF40647.1 | ABF43059.1 | Acid345_1645 | Acid345_4059 | Flagellar basal body FlaE. | PAS/PAC sensor hybrid histidine kinase. | 0.777 |
ABF40652.1 | ABF40638.1 | Acid345_1650 | Acid345_1636 | Flagellar biosynthesis/type III secretory pathway protein-like protein. | Flagellar motor switch protein FliM. | 0.983 |
ABF40652.1 | ABF40647.1 | Acid345_1650 | Acid345_1645 | Flagellar biosynthesis/type III secretory pathway protein-like protein. | Flagellar basal body FlaE. | 0.961 |
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