Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Psyr_0006 | Psyr_0007 | Psyr_0006 | Psyr_0007 | Putative phenylacetaldoxime dehydratase. | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | 0.924 |
| Psyr_0007 | Psyr_0006 | Psyr_0007 | Psyr_0006 | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | Putative phenylacetaldoxime dehydratase. | 0.924 |
| Psyr_0007 | Psyr_2273 | Psyr_0007 | Psyr_2273 | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | L-glutamine synthetase. | 0.903 |
| Psyr_0007 | Psyr_2734 | Psyr_0007 | Psyr_2734 | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | Benzaldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.946 |
| Psyr_0007 | Psyr_3402 | Psyr_0007 | Psyr_3402 | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | Aldehyde dehydrogenase. | 0.945 |
| Psyr_0007 | Psyr_3492 | Psyr_0007 | Psyr_3492 | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | L-glutamine synthetase. | 0.903 |
| Psyr_0007 | Psyr_3514 | Psyr_0007 | Psyr_3514 | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | Delta-1-piperideine-6-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.945 |
| Psyr_0007 | Psyr_3524 | Psyr_0007 | Psyr_3524 | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.945 |
| Psyr_0007 | Psyr_4268 | Psyr_0007 | Psyr_4268 | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | Amidase; Belongs to the amidase family. | 0.904 |
| Psyr_0007 | Psyr_4817 | Psyr_0007 | Psyr_4817 | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | L-glutamine synthetase. | 0.903 |
| Psyr_0007 | amiF | Psyr_0007 | Psyr_1166 | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | 0.912 |
| Psyr_2273 | Psyr_0007 | Psyr_2273 | Psyr_0007 | L-glutamine synthetase. | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | 0.903 |
| Psyr_2273 | Psyr_3402 | Psyr_2273 | Psyr_3402 | L-glutamine synthetase. | Aldehyde dehydrogenase. | 0.804 |
| Psyr_2273 | Psyr_3492 | Psyr_2273 | Psyr_3492 | L-glutamine synthetase. | L-glutamine synthetase. | 0.720 |
| Psyr_2273 | Psyr_3514 | Psyr_2273 | Psyr_3514 | L-glutamine synthetase. | Delta-1-piperideine-6-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.804 |
| Psyr_2273 | Psyr_3524 | Psyr_2273 | Psyr_3524 | L-glutamine synthetase. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.804 |
| Psyr_2273 | Psyr_4817 | Psyr_2273 | Psyr_4817 | L-glutamine synthetase. | L-glutamine synthetase. | 0.687 |
| Psyr_2273 | amiF | Psyr_2273 | Psyr_1166 | L-glutamine synthetase. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | 0.918 |
| Psyr_2734 | Psyr_0007 | Psyr_2734 | Psyr_0007 | Benzaldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | Aliphatic nitrilase; Arylacetonitrilase which is capable of hydrolyzing indole-3- acetonitrile (IAN) to the plant hormone indole-3-acetate (IAA), and allows the plant pathogenic bacterium to use IAN as a sole nitrogen source. Is also able to hydrolyze phenylpropionitrile (PPN), allowing the use of this compound as a sole nitrogen source. This enzyme may represent an additional mechanism for IAA biosynthesis or may be used to degrade and assimilate aldoximes and nitriles produced during host plant secondary metabolism. | 0.946 |
| Psyr_2734 | Psyr_4268 | Psyr_2734 | Psyr_4268 | Benzaldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | Amidase; Belongs to the amidase family. | 0.900 |
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