Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aspC | hppD | PSPTO_2163 | PSPTO_3553 | Aspartate aminotransferase; See PMID:20190049 for expression data. | 4-hydroxyphenylpyruvate dioxygenase; Identified by match to PFAM protein family HMM PF00903; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00903. | 0.939 |
| aspC | pheA | PSPTO_2163 | PSPTO_1747 | Aspartate aminotransferase; See PMID:20190049 for expression data. | Chorismate mutase/prephenate dehydratase; See PMID:20190049 for expression data. | 0.951 |
| aspC | phhA | PSPTO_2163 | PSPTO_1822 | Aspartate aminotransferase; See PMID:20190049 for expression data. | Phenylalanine-4-hydroxylase; Identified by match to TIGR protein family HMM TIGR01270. | 0.942 |
| aspC | phhB | PSPTO_2163 | PSPTO_1821 | Aspartate aminotransferase; See PMID:20190049 for expression data. | Pterin-4-alpha-carbinolamine dehydratase; Involved in tetrahydrobiopterin biosynthesis. Seems to both prevent the formation of 7-pterins and accelerate the formation of quinonoid-BH2. May also have a positive regulatory role in the expression of phhA (By similarity); Belongs to the pterin-4-alpha-carbinolamine dehydratase family. | 0.462 |
| aspC | tyrB | PSPTO_2163 | PSPTO_5339 | Aspartate aminotransferase; See PMID:20190049 for expression data. | Aromatic-amino-acid aminotransferase; See PMID:20190049 for expression data; similar to GP:13364513, and SP:P04693; identified by sequence similarity; putative. | 0.903 |
| fahA | hmgA | PSPTO_3550 | PSPTO_3551 | Fumarylacetoacetase; See PMID:20190049 for expression data. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.990 |
| fahA | hppD | PSPTO_3550 | PSPTO_3553 | Fumarylacetoacetase; See PMID:20190049 for expression data. | 4-hydroxyphenylpyruvate dioxygenase; Identified by match to PFAM protein family HMM PF00903; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00903. | 0.834 |
| fahA | maiA | PSPTO_3550 | PSPTO_3554 | Fumarylacetoacetase; See PMID:20190049 for expression data. | Maleylacetoacetate isomerase; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02798. | 0.989 |
| fahA | pheA | PSPTO_3550 | PSPTO_1747 | Fumarylacetoacetase; See PMID:20190049 for expression data. | Chorismate mutase/prephenate dehydratase; See PMID:20190049 for expression data. | 0.449 |
| fahA | phhA | PSPTO_3550 | PSPTO_1822 | Fumarylacetoacetase; See PMID:20190049 for expression data. | Phenylalanine-4-hydroxylase; Identified by match to TIGR protein family HMM TIGR01270. | 0.650 |
| fahA | phhB | PSPTO_3550 | PSPTO_1821 | Fumarylacetoacetase; See PMID:20190049 for expression data. | Pterin-4-alpha-carbinolamine dehydratase; Involved in tetrahydrobiopterin biosynthesis. Seems to both prevent the formation of 7-pterins and accelerate the formation of quinonoid-BH2. May also have a positive regulatory role in the expression of phhA (By similarity); Belongs to the pterin-4-alpha-carbinolamine dehydratase family. | 0.504 |
| hmgA | fahA | PSPTO_3551 | PSPTO_3550 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | Fumarylacetoacetase; See PMID:20190049 for expression data. | 0.990 |
| hmgA | hppD | PSPTO_3551 | PSPTO_3553 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 4-hydroxyphenylpyruvate dioxygenase; Identified by match to PFAM protein family HMM PF00903; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00903. | 0.991 |
| hmgA | maiA | PSPTO_3551 | PSPTO_3554 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | Maleylacetoacetate isomerase; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02798. | 0.989 |
| hmgA | pheA | PSPTO_3551 | PSPTO_1747 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | Chorismate mutase/prephenate dehydratase; See PMID:20190049 for expression data. | 0.412 |
| hmgA | phhA | PSPTO_3551 | PSPTO_1822 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | Phenylalanine-4-hydroxylase; Identified by match to TIGR protein family HMM TIGR01270. | 0.880 |
| hmgA | phhB | PSPTO_3551 | PSPTO_1821 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | Pterin-4-alpha-carbinolamine dehydratase; Involved in tetrahydrobiopterin biosynthesis. Seems to both prevent the formation of 7-pterins and accelerate the formation of quinonoid-BH2. May also have a positive regulatory role in the expression of phhA (By similarity); Belongs to the pterin-4-alpha-carbinolamine dehydratase family. | 0.659 |
| hppD | aspC | PSPTO_3553 | PSPTO_2163 | 4-hydroxyphenylpyruvate dioxygenase; Identified by match to PFAM protein family HMM PF00903; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00903. | Aspartate aminotransferase; See PMID:20190049 for expression data. | 0.939 |
| hppD | fahA | PSPTO_3553 | PSPTO_3550 | 4-hydroxyphenylpyruvate dioxygenase; Identified by match to PFAM protein family HMM PF00903; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00903. | Fumarylacetoacetase; See PMID:20190049 for expression data. | 0.834 |
| hppD | hmgA | PSPTO_3553 | PSPTO_3551 | 4-hydroxyphenylpyruvate dioxygenase; Identified by match to PFAM protein family HMM PF00903; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00903. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.991 |
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