Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aq_1103 | aq_1104 | aq_1103 | aq_1104 | Putative protein. | Putative protein; To R.prowazekii RP189. | 0.561 |
aq_1103 | aq_1106 | aq_1103 | aq_1106 | Putative protein. | Hypothetical protein. | 0.558 |
aq_1103 | fabH | aq_1103 | aq_1099 | Putative protein. | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.840 |
aq_1103 | plsX | aq_1103 | aq_1101 | Putative protein. | PlsX protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.894 |
aq_1103 | purQ | aq_1103 | aq_1105 | Putative protein. | Phosphoribosyl formylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist [...] | 0.558 |
aq_1103 | rpmF | aq_1103 | aq_1102 | Putative protein. | Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.985 |
aq_1104 | aq_1103 | aq_1104 | aq_1103 | Putative protein; To R.prowazekii RP189. | Putative protein. | 0.561 |
aq_1104 | aq_1106 | aq_1104 | aq_1106 | Putative protein; To R.prowazekii RP189. | Hypothetical protein. | 0.768 |
aq_1104 | fabH | aq_1104 | aq_1099 | Putative protein; To R.prowazekii RP189. | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.583 |
aq_1104 | plsX | aq_1104 | aq_1101 | Putative protein; To R.prowazekii RP189. | PlsX protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.608 |
aq_1104 | purQ | aq_1104 | aq_1105 | Putative protein; To R.prowazekii RP189. | Phosphoribosyl formylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist [...] | 0.770 |
aq_1104 | rpmF | aq_1104 | aq_1102 | Putative protein; To R.prowazekii RP189. | Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.561 |
aq_1106 | aq_1103 | aq_1106 | aq_1103 | Hypothetical protein. | Putative protein. | 0.558 |
aq_1106 | aq_1104 | aq_1106 | aq_1104 | Hypothetical protein. | Putative protein; To R.prowazekii RP189. | 0.768 |
aq_1106 | aq_1741 | aq_1106 | aq_1741 | Hypothetical protein. | Putative protein. | 0.582 |
aq_1106 | aq_880 | aq_1106 | aq_880 | Hypothetical protein. | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.804 |
aq_1106 | fabH | aq_1106 | aq_1099 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.558 |
aq_1106 | plsX | aq_1106 | aq_1101 | Hypothetical protein. | PlsX protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.558 |
aq_1106 | purQ | aq_1106 | aq_1105 | Hypothetical protein. | Phosphoribosyl formylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist [...] | 0.773 |
aq_1106 | rpmF | aq_1106 | aq_1102 | Hypothetical protein. | Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.558 |
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