Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
apfA | aq_155 | aq_158 | aq_155 | AP4A hydrolase; Belongs to the Nudix hydrolase family. | Putative protein. | 0.444 |
apfA | aq_156 | aq_158 | aq_156 | AP4A hydrolase; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.773 |
apfA | aq_157 | aq_158 | aq_157 | AP4A hydrolase; Belongs to the Nudix hydrolase family. | Putative protein; Belongs to the Skp family. | 0.773 |
apfA | ctaA | aq_158 | aq_153 | AP4A hydrolase; Belongs to the Nudix hydrolase family. | Heme O oxygenase. | 0.444 |
apfA | ctaB | aq_158 | aq_154 | AP4A hydrolase; Belongs to the Nudix hydrolase family. | Cytochrome c oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.444 |
apfA | hisIE | aq_158 | aq_1968 | AP4A hydrolase; Belongs to the Nudix hydrolase family. | phosphoribosyl-ATP pyrophosphohydrolase; In the C-terminal section; belongs to the PRA-PH family. | 0.421 |
apfA | mutT | aq_158 | aq_1449 | AP4A hydrolase; Belongs to the Nudix hydrolase family. | 8-OXO-dGTPase domain (mutT domain); Belongs to the Nudix hydrolase family. | 0.737 |
apfA | tly | aq_158 | aq_773 | AP4A hydrolase; Belongs to the Nudix hydrolase family. | Hemolysin. | 0.776 |
aq_155 | apfA | aq_155 | aq_158 | Putative protein. | AP4A hydrolase; Belongs to the Nudix hydrolase family. | 0.444 |
aq_155 | aq_156 | aq_155 | aq_156 | Putative protein. | Hypothetical protein. | 0.466 |
aq_155 | aq_157 | aq_155 | aq_157 | Putative protein. | Putative protein; Belongs to the Skp family. | 0.444 |
aq_155 | ctaA | aq_155 | aq_153 | Putative protein. | Heme O oxygenase. | 0.837 |
aq_155 | ctaB | aq_155 | aq_154 | Putative protein. | Cytochrome c oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.951 |
aq_156 | apfA | aq_156 | aq_158 | Hypothetical protein. | AP4A hydrolase; Belongs to the Nudix hydrolase family. | 0.773 |
aq_156 | aq_155 | aq_156 | aq_155 | Hypothetical protein. | Putative protein. | 0.466 |
aq_156 | aq_157 | aq_156 | aq_157 | Hypothetical protein. | Putative protein; Belongs to the Skp family. | 0.773 |
aq_156 | ctaA | aq_156 | aq_153 | Hypothetical protein. | Heme O oxygenase. | 0.763 |
aq_156 | ctaB | aq_156 | aq_154 | Hypothetical protein. | Cytochrome c oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.544 |
aq_157 | apfA | aq_157 | aq_158 | Putative protein; Belongs to the Skp family. | AP4A hydrolase; Belongs to the Nudix hydrolase family. | 0.773 |
aq_157 | aq_155 | aq_157 | aq_155 | Putative protein; Belongs to the Skp family. | Putative protein. | 0.444 |
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