STRINGSTRING
apfA apfA tly tly aq_156 aq_156 aq_157 aq_157 mutT mutT ctaA ctaA ctaB ctaB aq_155 aq_155 hisIE hisIE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apfAAP4A hydrolase; Belongs to the Nudix hydrolase family. (134 aa)    
Predicted Functional Partners:
tly
Hemolysin.
      0.776
aq_156
Hypothetical protein.
       0.773
aq_157
Putative protein; Belongs to the Skp family.
       0.773
mutT
8-OXO-dGTPase domain (mutT domain); Belongs to the Nudix hydrolase family.
      
 0.737
ctaA
Heme O oxygenase.
       0.444
ctaB
Cytochrome c oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.444
aq_155
Putative protein.
       0.444
hisIE
phosphoribosyl-ATP pyrophosphohydrolase; In the C-terminal section; belongs to the PRA-PH family.
     
 0.421
Your Current Organism:
Aquifex aeolicus
NCBI taxonomy Id: 224324
Other names: A. aeolicus VF5, Aquifex aeolicus VF5, Aquifex aeolicus str. VF5
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