Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aco | acs | aq_1784 | aq_2103 | Aconitase. | Acetyl-coenzyme A synthetase c-terminal fragment. | 0.706 |
aco | acs-2 | aq_1784 | aq_2104 | Aconitase. | Acetyl-coenzyme A synthetase. | 0.706 |
aco | fadD | aq_1784 | aq_999 | Aconitase. | Long-chain-fatty-acid CoA ligase. | 0.420 |
aco | gltA | aq_1784 | aq_150 | Aconitase. | Citrate synthase. | 0.983 |
aco | lytB | aq_1784 | aq_1739 | Aconitase. | LytB protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.775 |
acs | aco | aq_2103 | aq_1784 | Acetyl-coenzyme A synthetase c-terminal fragment. | Aconitase. | 0.706 |
acs | acs-2 | aq_2103 | aq_2104 | Acetyl-coenzyme A synthetase c-terminal fragment. | Acetyl-coenzyme A synthetase. | 0.994 |
acs | aldH1 | aq_2103 | aq_186 | Acetyl-coenzyme A synthetase c-terminal fragment. | Aldehyde dehydrogenase. | 0.595 |
acs | cobB | aq_2103 | aq_2170 | Acetyl-coenzyme A synthetase c-terminal fragment. | Hypothetical protein; NAD-dependent protein deacetylase which modulates the activities of several proteins which are inactive in their acetylated form; Belongs to the sirtuin family. Class III subfamily. | 0.589 |
acs | cstA | aq_2103 | aq_1265 | Acetyl-coenzyme A synthetase c-terminal fragment. | Carbon starvation protein A; Involved in peptide utilization. Belongs to the peptide transporter carbon starvation (CstA) (TC 2.A.114) family. | 0.626 |
acs | fabF | aq_2103 | aq_1717 | Acetyl-coenzyme A synthetase c-terminal fragment. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.776 |
acs | fadD | aq_2103 | aq_999 | Acetyl-coenzyme A synthetase c-terminal fragment. | Long-chain-fatty-acid CoA ligase. | 0.591 |
acs | gltA | aq_2103 | aq_150 | Acetyl-coenzyme A synthetase c-terminal fragment. | Citrate synthase. | 0.812 |
acs | lytB | aq_2103 | aq_1739 | Acetyl-coenzyme A synthetase c-terminal fragment. | LytB protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.758 |
acs | ssf | aq_2103 | aq_2106 | Acetyl-coenzyme A synthetase c-terminal fragment. | Na(+):solute symporter (Ssf family); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.687 |
acs-2 | aco | aq_2104 | aq_1784 | Acetyl-coenzyme A synthetase. | Aconitase. | 0.706 |
acs-2 | acs | aq_2104 | aq_2103 | Acetyl-coenzyme A synthetase. | Acetyl-coenzyme A synthetase c-terminal fragment. | 0.994 |
acs-2 | aldH1 | aq_2104 | aq_186 | Acetyl-coenzyme A synthetase. | Aldehyde dehydrogenase. | 0.595 |
acs-2 | cobB | aq_2104 | aq_2170 | Acetyl-coenzyme A synthetase. | Hypothetical protein; NAD-dependent protein deacetylase which modulates the activities of several proteins which are inactive in their acetylated form; Belongs to the sirtuin family. Class III subfamily. | 0.589 |
acs-2 | cstA | aq_2104 | aq_1265 | Acetyl-coenzyme A synthetase. | Carbon starvation protein A; Involved in peptide utilization. Belongs to the peptide transporter carbon starvation (CstA) (TC 2.A.114) family. | 0.626 |
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