Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aq_729 | ccdA | aq_729 | aq_731 | Hypothetical protein. | Cytochrome c-type biogenesis protein. | 0.752 |
aq_729 | ctrA1 | aq_729 | aq_724 | Hypothetical protein. | Cation transporting ATPase (E1-E2 family). | 0.655 |
aq_729 | hisH | aq_729 | aq_732 | Hypothetical protein. | Amidotransferase HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF (By similarity). | 0.752 |
aq_729 | ldhA | aq_729 | aq_727 | Hypothetical protein. | D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.655 |
aq_729 | mpg | aq_729 | aq_718 | Hypothetical protein. | Mannose-1-phosphate guanyltransferase. | 0.637 |
aq_729 | speC | aq_729 | aq_728 | Hypothetical protein. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.773 |
ccdA | aq_729 | aq_731 | aq_729 | Cytochrome c-type biogenesis protein. | Hypothetical protein. | 0.752 |
ccdA | ctrA1 | aq_731 | aq_724 | Cytochrome c-type biogenesis protein. | Cation transporting ATPase (E1-E2 family). | 0.706 |
ccdA | hisH | aq_731 | aq_732 | Cytochrome c-type biogenesis protein. | Amidotransferase HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF (By similarity). | 0.773 |
ccdA | ldhA | aq_731 | aq_727 | Cytochrome c-type biogenesis protein. | D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.672 |
ccdA | mpg | aq_731 | aq_718 | Cytochrome c-type biogenesis protein. | Mannose-1-phosphate guanyltransferase. | 0.620 |
ccdA | speC | aq_731 | aq_728 | Cytochrome c-type biogenesis protein. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.752 |
ctrA1 | aq_729 | aq_724 | aq_729 | Cation transporting ATPase (E1-E2 family). | Hypothetical protein. | 0.655 |
ctrA1 | ccdA | aq_724 | aq_731 | Cation transporting ATPase (E1-E2 family). | Cytochrome c-type biogenesis protein. | 0.706 |
ctrA1 | hisH | aq_724 | aq_732 | Cation transporting ATPase (E1-E2 family). | Amidotransferase HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF (By similarity). | 0.637 |
ctrA1 | ldhA | aq_724 | aq_727 | Cation transporting ATPase (E1-E2 family). | D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.844 |
ctrA1 | mpg | aq_724 | aq_718 | Cation transporting ATPase (E1-E2 family). | Mannose-1-phosphate guanyltransferase. | 0.839 |
ctrA1 | speC | aq_724 | aq_728 | Cation transporting ATPase (E1-E2 family). | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.684 |
glpK | mpg | aq_434 | aq_718 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | Mannose-1-phosphate guanyltransferase. | 0.520 |
glpK | speC | aq_434 | aq_728 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.657 |
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