Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BT_1040 | BT_1043 | SusC homolog. | SusD homolog. | 0.803 |
BT_1042 | BT_1043 | SusC homolog. | SusD homolog. | 0.968 |
BT_1042 | BT_1044 | SusC homolog. | Putative secreted endoglycosidase, GH family 18. | 0.770 |
BT_1042 | BT_1045 | SusC homolog. | Concanavalin A-like lectin/glucanase. | 0.854 |
BT_1042 | BT_1046 | SusC homolog. | SusC homolog. | 0.491 |
BT_1042 | BT_3983 | SusC homolog. | SusC homolog. | 0.473 |
BT_1043 | BT_1040 | SusD homolog. | SusC homolog. | 0.803 |
BT_1043 | BT_1042 | SusD homolog. | SusC homolog. | 0.968 |
BT_1043 | BT_1044 | SusD homolog. | Putative secreted endoglycosidase, GH family 18. | 0.867 |
BT_1043 | BT_1045 | SusD homolog. | Concanavalin A-like lectin/glucanase. | 0.883 |
BT_1043 | BT_1046 | SusD homolog. | SusC homolog. | 0.870 |
BT_1043 | BT_3750 | SusD homolog. | SusC homolog. | 0.784 |
BT_1043 | BT_3751 | SusD homolog. | SusC homolog; Outer membrane protein Omp117 homolog. | 0.785 |
BT_1043 | BT_3983 | SusD homolog. | SusC homolog. | 0.829 |
BT_1043 | BT_4404 | SusD homolog. | SusC homolog. | 0.782 |
BT_1043 | BT_4707 | SusD homolog. | SusC homolog. | 0.783 |
BT_1044 | BT_1042 | Putative secreted endoglycosidase, GH family 18. | SusC homolog. | 0.770 |
BT_1044 | BT_1043 | Putative secreted endoglycosidase, GH family 18. | SusD homolog. | 0.867 |
BT_1044 | BT_1045 | Putative secreted endoglycosidase, GH family 18. | Concanavalin A-like lectin/glucanase. | 0.953 |
BT_1044 | BT_1046 | Putative secreted endoglycosidase, GH family 18. | SusC homolog. | 0.487 |
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