Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBU_0819 | CBU_1677 | CBU_0819 | CBU_1677 | Glutathione S-transferase. | Hypothetical cytosolic protein. | 0.575 |
| CBU_0819 | ahpD | CBU_0819 | CBU_1478 | Glutathione S-transferase. | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.566 |
| CBU_0819 | speG | CBU_0819 | CBU_1678 | Glutathione S-transferase. | Spermidine N1-acetyltransferase. | 0.569 |
| CBU_1477 | ahpD | CBU_1477 | CBU_1478 | Peroxiredoxin. | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.973 |
| CBU_1477 | msrA/msrB | CBU_1477 | CBU_1306 | Peroxiredoxin. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.473 |
| CBU_1477 | oxyR | CBU_1477 | CBU_1476 | Peroxiredoxin. | Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family. | 0.698 |
| CBU_1677 | CBU_0819 | CBU_1677 | CBU_0819 | Hypothetical cytosolic protein. | Glutathione S-transferase. | 0.575 |
| CBU_1677 | ahpD | CBU_1677 | CBU_1478 | Hypothetical cytosolic protein. | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.459 |
| CBU_1677 | speG | CBU_1677 | CBU_1678 | Hypothetical cytosolic protein. | Spermidine N1-acetyltransferase. | 0.726 |
| ahpD | CBU_0819 | CBU_1478 | CBU_0819 | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Glutathione S-transferase. | 0.566 |
| ahpD | CBU_1477 | CBU_1478 | CBU_1477 | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Peroxiredoxin. | 0.973 |
| ahpD | CBU_1677 | CBU_1478 | CBU_1677 | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Hypothetical cytosolic protein. | 0.459 |
| ahpD | msrA/msrB | CBU_1478 | CBU_1306 | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.453 |
| ahpD | oxyR | CBU_1478 | CBU_1476 | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family. | 0.873 |
| ahpD | speG | CBU_1478 | CBU_1678 | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Spermidine N1-acetyltransferase. | 0.443 |
| msrA/msrB | CBU_1477 | CBU_1306 | CBU_1477 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Peroxiredoxin. | 0.473 |
| msrA/msrB | ahpD | CBU_1306 | CBU_1478 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.453 |
| oxyR | CBU_1477 | CBU_1476 | CBU_1477 | Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family. | Peroxiredoxin. | 0.698 |
| oxyR | ahpD | CBU_1476 | CBU_1478 | Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family. | Peroxiredoxin reductase (NAD(P)H); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.873 |
| speG | CBU_0819 | CBU_1678 | CBU_0819 | Spermidine N1-acetyltransferase. | Glutathione S-transferase. | 0.569 |
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