Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBU_1808 | CBU_1809 | CBU_1808 | CBU_1809 | Export ABC transporter permease protein. | ABC transporter ATP-binding protein. | 0.999 |
CBU_1808 | CBU_1811 | CBU_1808 | CBU_1811 | Export ABC transporter permease protein. | Type I secretion outer membrane protein. | 0.913 |
CBU_1808 | macA | CBU_1808 | CBU_1810 | Export ABC transporter permease protein. | Macrolide-specific efflux protein. | 0.976 |
CBU_1808 | pdxB | CBU_1808 | CBU_1812 | Export ABC transporter permease protein. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.629 |
CBU_1809 | CBU_1808 | CBU_1809 | CBU_1808 | ABC transporter ATP-binding protein. | Export ABC transporter permease protein. | 0.999 |
CBU_1809 | CBU_1811 | CBU_1809 | CBU_1811 | ABC transporter ATP-binding protein. | Type I secretion outer membrane protein. | 0.856 |
CBU_1809 | macA | CBU_1809 | CBU_1810 | ABC transporter ATP-binding protein. | Macrolide-specific efflux protein. | 0.913 |
CBU_1809 | pdxB | CBU_1809 | CBU_1812 | ABC transporter ATP-binding protein. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.620 |
CBU_1811 | CBU_1808 | CBU_1811 | CBU_1808 | Type I secretion outer membrane protein. | Export ABC transporter permease protein. | 0.913 |
CBU_1811 | CBU_1809 | CBU_1811 | CBU_1809 | Type I secretion outer membrane protein. | ABC transporter ATP-binding protein. | 0.856 |
CBU_1811 | macA | CBU_1811 | CBU_1810 | Type I secretion outer membrane protein. | Macrolide-specific efflux protein. | 0.965 |
CBU_1811 | pdxB | CBU_1811 | CBU_1812 | Type I secretion outer membrane protein. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.636 |
cysC | pdxB | CBU_0700 | CBU_1812 | Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.729 |
macA | CBU_1808 | CBU_1810 | CBU_1808 | Macrolide-specific efflux protein. | Export ABC transporter permease protein. | 0.976 |
macA | CBU_1809 | CBU_1810 | CBU_1809 | Macrolide-specific efflux protein. | ABC transporter ATP-binding protein. | 0.913 |
macA | CBU_1811 | CBU_1810 | CBU_1811 | Macrolide-specific efflux protein. | Type I secretion outer membrane protein. | 0.965 |
macA | pdxB | CBU_1810 | CBU_1812 | Macrolide-specific efflux protein. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.613 |
pdxB | CBU_1808 | CBU_1812 | CBU_1808 | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | Export ABC transporter permease protein. | 0.629 |
pdxB | CBU_1809 | CBU_1812 | CBU_1809 | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | ABC transporter ATP-binding protein. | 0.620 |
pdxB | CBU_1811 | CBU_1812 | CBU_1811 | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | Type I secretion outer membrane protein. | 0.636 |
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