Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBU_0166 | CBU_0324 | CBU_0166 | CBU_0324 | Hypothetical protein. | acyl-CoA synthetase. | 0.931 |
CBU_0166 | CBU_0787 | CBU_0166 | CBU_0787 | Hypothetical protein. | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.892 |
CBU_0166 | CBU_0788 | CBU_0166 | CBU_0788 | Hypothetical protein. | Polyketide synthase. | 0.999 |
CBU_0166 | fabD | CBU_0166 | CBU_0494 | Hypothetical protein. | malonyl-CoA-[acyl-carrier-protein] transacylase. | 0.551 |
CBU_0166 | hemL | CBU_0166 | CBU_1882 | Hypothetical protein. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.724 |
CBU_0324 | CBU_0166 | CBU_0324 | CBU_0166 | acyl-CoA synthetase. | Hypothetical protein. | 0.931 |
CBU_0324 | CBU_0787 | CBU_0324 | CBU_0787 | acyl-CoA synthetase. | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.960 |
CBU_0324 | CBU_0788 | CBU_0324 | CBU_0788 | acyl-CoA synthetase. | Polyketide synthase. | 0.996 |
CBU_0324 | fabD | CBU_0324 | CBU_0494 | acyl-CoA synthetase. | malonyl-CoA-[acyl-carrier-protein] transacylase. | 0.912 |
CBU_0324 | hemL | CBU_0324 | CBU_1882 | acyl-CoA synthetase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.804 |
CBU_0787 | CBU_0166 | CBU_0787 | CBU_0166 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein. | 0.892 |
CBU_0787 | CBU_0324 | CBU_0787 | CBU_0324 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | acyl-CoA synthetase. | 0.960 |
CBU_0787 | CBU_0788 | CBU_0787 | CBU_0788 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Polyketide synthase. | 0.999 |
CBU_0787 | fabD | CBU_0787 | CBU_0494 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | malonyl-CoA-[acyl-carrier-protein] transacylase. | 0.913 |
CBU_0787 | hemL | CBU_0787 | CBU_1882 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.950 |
CBU_0788 | CBU_0166 | CBU_0788 | CBU_0166 | Polyketide synthase. | Hypothetical protein. | 0.999 |
CBU_0788 | CBU_0324 | CBU_0788 | CBU_0324 | Polyketide synthase. | acyl-CoA synthetase. | 0.996 |
CBU_0788 | CBU_0787 | CBU_0788 | CBU_0787 | Polyketide synthase. | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
CBU_0788 | fabD | CBU_0788 | CBU_0494 | Polyketide synthase. | malonyl-CoA-[acyl-carrier-protein] transacylase. | 0.999 |
CBU_0788 | hemL | CBU_0788 | CBU_1882 | Polyketide synthase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.949 |
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