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HNE_1636 HNE_1636 HNE_1635 HNE_1635 HNE_1637 HNE_1637 HNE_1632 HNE_1632 HNE_2237 HNE_2237 HNE_1631 HNE_1631 gmk gmk HNE_1634 HNE_1634 HNE_1633 HNE_1633 HNE_1495 HNE_1495 HNE_1508 HNE_1508
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
HNE_1636Protein kinase; Identified by match to protein family HMM PF00069. (438 aa)    
Predicted Functional Partners:
HNE_1635
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.768
HNE_1637
Cysteine protease, papain family; Identified by match to protein family HMM PF00112.
 
     0.706
HNE_1632
ECF sigma factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF07638; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 
 0.617
HNE_2237
Carbohydrate kinase, FGGY family; Identified by match to protein family HMM PF00069; match to protein family HMM PF00481.
 
 
0.605
HNE_1631
Protein kinase; Identified by match to protein family HMM PF00069.
 
    
0.529
gmk
Putative guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
     0.507
HNE_1634
Hypothetical protein; Identified by Glimmer2; putative.
       0.469
HNE_1633
Hypothetical protein; Identified by Glimmer2; putative.
       0.463
HNE_1495
ECF sigma factor family protein; Identified by match to protein family HMM PF07638; match to protein family HMM TIGR02937.
 
 
 
 0.453
HNE_1508
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518.
   
 
 0.447
Your Current Organism:
Hyphomonas neptunium
NCBI taxonomy Id: 228405
Other names: H. neptunium ATCC 15444, Hyphomonas neptunium ATCC 15444, Hyphomonas neptunium str. ATCC 15444, Hyphomonas neptunium strain ATCC 15444
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