STRINGSTRING
glgA1 glgA1 glgB glgB glgC glgC amyA amyA NE0074 NE0074 NE0466 NE0466 pgi pgi NE0620 NE0620 bktB bktB hslU hslU hslV hslV
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgA1Glycosyl transferases group 1; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (495 aa)    
Predicted Functional Partners:
glgB
Glycoside hydrolase family 13:Isoamylase N-terminus; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.999
glgC
ADP-glucose pyrophosphorylase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.999
amyA
Glycosyl hydrolase family 57.
  
 
  0.921
NE0074
Putative alpha-glucan phosphorylase, putative.
 
  
 0.905
NE0466
Glycosyltransferase family 35.
 
  
 0.900
pgi
Phosphoglucose isomerase (PGI).
  
  
 0.875
NE0620
Iron-containing alcohol dehydrogenase.
   
    0.736
bktB
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.706
hslU
hslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
  
    0.674
hslV
Multispecific proteasome proteases; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
    0.600
Your Current Organism:
Nitrosomonas europaea
NCBI taxonomy Id: 228410
Other names: N. europaea ATCC 19718, Nitrosomonas europaea ATCC 19718, Nitrosomonas europaea str. ATCC 19718
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.