STRINGSTRING
Acid_3841 Acid_3841 Acid_3840 Acid_3840 Acid_1311 Acid_1311 Acid_3274 Acid_3274 Acid_4313 Acid_4313 Acid_7519 Acid_7519 Acid_4243 Acid_4243 Acid_2015 Acid_2015 Acid_7677 Acid_7677 Acid_0870 Acid_0870 Acid_7625 Acid_7625
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_3841PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aba:Acid345_4049 serine/threonine protein kinase with TPR repeats. (907 aa)    
Predicted Functional Partners:
Acid_3840
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma factor, ECF family protein; Sigma-70, region 4 type 2; KEGG: rba:RB621 hypothetical protein, putative sigma factor.
 
 
   0.886
Acid_1311
Transcriptional regulator, Fis family; PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
  
   0.782
Acid_3274
PFAM: protein phosphatase 2C domain protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
  
   0.777
Acid_4313
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: bld:BLi01797 protein phosphatase; RBL04052.
  
   0.776
Acid_7519
PFAM: protein phosphatase 2C domain protein; KEGG: cya:CYA_0212 protein phosphatase 2C family protein.
  
   0.775
Acid_4243
SMART: serine/threonine protein kinase; KEGG: aba:Acid345_4118 serine/threonine protein kinase.
  
     0.772
Acid_2015
KEGG: aba:Acid345_4390 serine/threonine protein kinase.
  
     0.754
Acid_7677
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 4 domain protein; sigma factor, ECF family protein; Sigma-70, region 4 type 2; KEGG: gvi:gll4071 hypothetical protein.
 
 
   0.716
Acid_0870
PFAM: sigma factor, ECF family protein; KEGG: aba:Acid345_4048 sigma-24, ECF subfamily; Belongs to the sigma-70 factor family.
 
 
   0.714
Acid_7625
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 4 domain protein; sigma factor, ECF family protein; Sigma-70, region 4 type 2; KEGG: gvi:gll4071 hypothetical protein.
 
 
   0.714
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.