STRINGSTRING
Acid_4345 Acid_4345 Acid_5261 Acid_5261 Acid_5260 Acid_5260 Acid_1344 Acid_1344 Acid_1345 Acid_1345 Acid_0107 Acid_0107 Acid_0106 Acid_0106 Acid_2843 Acid_2843 Acid_3884 Acid_3884 Acid_4343 Acid_4343 Acid_4344 Acid_4344
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Acid_4345Serine phosphatase; PFAM: GAF domain protein; protein of unknown function DUF214; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: gvi:glr1418 putative ABC transport system permease protein. (1243 aa)    
Predicted Functional Partners:
Acid_5261
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mca:MCA1663 anti-anti-sigma factor family protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.845
Acid_5260
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dvu:DVU1995 anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.844
Acid_1344
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: mca:MCA1666 sensor histidine kinase.
 
 
 0.820
Acid_1345
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mag:amb3519 anti-anti-sigma regulatory factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.806
Acid_0107
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aba:Acid345_2516 anti-sigma-factor antagonist.
 
 
 0.788
Acid_0106
KEGG: aba:Acid345_2515 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 
 0.763
Acid_2843
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aba:Acid345_1765 anti-sigma-factor antagonist.
 
 
 0.751
Acid_3884
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aba:Acid345_2516 anti-sigma-factor antagonist.
 
 
 0.734
Acid_4343
PFAM: protein of unknown function DUF1211; KEGG: dar:Daro_3436 protein of unknown function DUF1211.
       0.693
Acid_4344
KEGG: rha:RHA1_ro09131 hypothetical protein.
       0.693
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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