STRINGSTRING
Ava_1255 Ava_1255 Ava_1254 Ava_1254 Ava_1564 Ava_1564 Ava_0441 Ava_0441 Ava_2758 Ava_2758 Ava_2755 Ava_2755 Ava_0238 Ava_0238 Ava_1029 Ava_1029 Ava_4430 Ava_4430 Ava_2754 Ava_2754 Ava_4753 Ava_4753
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ava_1255Predicted sensor protein. (464 aa)    
Predicted Functional Partners:
Ava_1254
Pentapeptide repeat protein.
 
    0.822
Ava_1564
Multi-sensor hybrid histidine kinase.
  
 
 0.760
Ava_0441
PEP-utilizing enzyme, mobile region.
 
     0.747
Ava_2758
Conserved hypothetical protein.
  
     0.746
Ava_2755
Conserved hypothetical protein.
 
     0.720
Ava_0238
Multi-component transcriptional regulator, winged helix family.
  
 
 0.713
Ava_1029
Multi-sensor hybrid histidine kinase.
  
 
 0.711
Ava_4430
Conserved hypothetical protein.
  
     0.684
Ava_2754
Ferrochelatase; Belongs to the ferrochelatase family.
 
     0.676
Ava_4753
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.648
Your Current Organism:
Trichormus variabilis
NCBI taxonomy Id: 240292
Other names: Anabaena flos-aquae A-37, Anabaena flos-aquae UTCC 67, Anabaena sp. CCALA 007, Anabaena sp. PCC 7937, Anabaena variabilis ATCC 29413, Anabaena variabilis IAM M-204, Anabaena variabilis NIES-2095, Anabaena variabilis UTCC 105, Nostoc sp. PCC 7937, T. variabilis ATCC 29413, Trichormus variabilis ATCC 29413
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