Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Ava_0198 | Ava_0238 | Multi-sensor hybrid histidine kinase. | Multi-component transcriptional regulator, winged helix family. | 0.992 |
Ava_0198 | Ava_1005 | Multi-sensor hybrid histidine kinase. | Multi-sensor signal transduction histidine kinase. | 0.986 |
Ava_0198 | Ava_1564 | Multi-sensor hybrid histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.992 |
Ava_0198 | Ava_2239 | Multi-sensor hybrid histidine kinase. | Adenylate/guanylate cyclase. | 0.989 |
Ava_0198 | Ava_2771 | Multi-sensor hybrid histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.990 |
Ava_0198 | Ava_3467 | Multi-sensor hybrid histidine kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.985 |
Ava_0198 | Ava_4489 | Multi-sensor hybrid histidine kinase. | Serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor. | 0.747 |
Ava_0198 | Ava_4696 | Multi-sensor hybrid histidine kinase. | GAF sensor hybrid histidine kinase. | 0.992 |
Ava_0198 | Ava_4701 | Multi-sensor hybrid histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.989 |
Ava_0198 | Ava_4753 | Multi-sensor hybrid histidine kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.985 |
Ava_0238 | Ava_0198 | Multi-component transcriptional regulator, winged helix family. | Multi-sensor hybrid histidine kinase. | 0.992 |
Ava_0238 | Ava_1005 | Multi-component transcriptional regulator, winged helix family. | Multi-sensor signal transduction histidine kinase. | 0.992 |
Ava_0238 | Ava_1564 | Multi-component transcriptional regulator, winged helix family. | Multi-sensor hybrid histidine kinase. | 0.996 |
Ava_0238 | Ava_2239 | Multi-component transcriptional regulator, winged helix family. | Adenylate/guanylate cyclase. | 0.995 |
Ava_0238 | Ava_2771 | Multi-component transcriptional regulator, winged helix family. | Multi-sensor hybrid histidine kinase. | 0.991 |
Ava_0238 | Ava_3467 | Multi-component transcriptional regulator, winged helix family. | PAS/PAC sensor hybrid histidine kinase. | 0.991 |
Ava_0238 | Ava_4489 | Multi-component transcriptional regulator, winged helix family. | Serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor. | 0.844 |
Ava_0238 | Ava_4696 | Multi-component transcriptional regulator, winged helix family. | GAF sensor hybrid histidine kinase. | 0.997 |
Ava_0238 | Ava_4701 | Multi-component transcriptional regulator, winged helix family. | Multi-sensor hybrid histidine kinase. | 0.992 |
Ava_0238 | Ava_4753 | Multi-component transcriptional regulator, winged helix family. | PAS/PAC sensor hybrid histidine kinase. | 0.993 |
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