STRINGSTRING
ppcA ppcA omcB omcB omcZ omcZ omcE omcE macA macA omcF omcF imcH imcH omcC omcC GSU0105 GSU0105 GSU3271 GSU3271 omcT omcT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppcACytochrome c; 3 heme-binding sites. (91 aa)    
Predicted Functional Partners:
omcB
Lipoprotein cytochrome c; Involved in anaerobic respiration with Fe(3+) as terminal electron acceptor. Acts as an electron-transport mediator in the dissimilatory reduction of Fe(3+).
      
 0.757
omcZ
Cytochrome c; 8 heme-binding sites.
   
  
 0.737
omcE
Cytochrome c; 4 heme-binding sites.
     
 0.666
macA
Cytochrome c peroxidase; 2 heme-binding sites.
      
 0.654
omcF
Lipoprotein cytochrome c, 1 heme-binding site.
      
 0.604
imcH
Cytochrome c; Redox protein involved in a high-potential metal respiratory pathway. Is required only for electron transfer to terminal extracellular electron acceptors with redox potentials higher than -0.1 V. ImcH likely transfers electrons from the quinone pool to a periplasmic acceptor.
      
 0.600
omcC
Lipoprotein cytochrome c; Not involved in Fe(3+) reduction.
      
 0.599
GSU0105
Cytochrome c; 3 heme-binding sites.
      
 0.595
GSU3271
Outer membrane channel, OprB family.
      
 0.592
omcT
Cytochrome c; 6 heme-binding sites.
      
 0.591
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.