STRINGSTRING
CV_3505 CV_3505 CV_3444 CV_3444 CV_2645 CV_2645 CV_1621 CV_1621 CV_3248 CV_3248 CV_2643 CV_2643 CV_0473 CV_0473 CV_1951 CV_1951 CV_2644 CV_2644 evgS evgS CV_2213 CV_2213
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_3505Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0784. (402 aa)    
Predicted Functional Partners:
CV_3444
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1366.
 
 
  0.979
CV_2645
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1366.
 
 
  0.978
CV_1621
Probable sensor/response regulatory hybrid protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784.
 
 
0.940
CV_3248
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0784.
 
 
0.936
CV_2643
Probable sensor/response regulator hybrid; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784.
 
 
0.935
CV_0473
Probable sensor histidine kinase protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0642.
 
 0.932
CV_1951
Probable two-component sensor; Identified by sequence similarity; putative; ORF located using Blastx/COG0784.
 
0.932
CV_2644
Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784.
  
  
 
0.909
evgS
Sensor protein evgS precursor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784.
 
 
0.888
CV_2213
Probable sensor histidine kinase/response regulator; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784.
 
 
0.870
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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