STRINGSTRING
gshB gshB CV_4276 CV_4276 CV_2036 CV_2036 pepA pepA CV_2904 CV_2904 ggt ggt pepN pepN CV_4373 CV_4373 gst2 gst2 CV_3306 CV_3306 pepD pepD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshBGlutathione synthetase protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0189. (314 aa)    
Predicted Functional Partners:
CV_4276
Probable glutamate-cysteine ligase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
 
  
 0.983
CV_2036
Probable peroxiredoxin/glutaredoxin family protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0695.
 
  
 0.952
pepA
Aminopeptidase A/I; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.935
CV_2904
Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.933
ggt
G-glutamyltransferase precursor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0405.
    
 0.929
pepN
Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0308.
    
 0.928
CV_4373
Probable glutathione transferase; Identified by sequence similarity; putative; ORF located using Blastx/COG0625.
 
  
 0.926
gst2
Glutathione S-transferase family protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0625.
 
  
 0.921
CV_3306
Probable glutathione S-transferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0625.
 
  
 0.920
pepD
Aminoacyl-histidine dipeptidase precursor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2195.
    
 0.919
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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