Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70730.1 | ABK72306.1 | MSMEG_2467 | MSMEG_0033 | Transketolase, central region; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780. | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | 0.957 |
| ABK71056.1 | ABK71684.1 | MSMEG_0032 | MSMEG_4366 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | 0.480 |
| ABK71056.1 | ABK72306.1 | MSMEG_0032 | MSMEG_0033 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | 0.958 |
| ABK71056.1 | ABK74946.1 | MSMEG_0032 | MSMEG_6206 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Serine/threonine protein kinase PksC; Identified by match to protein family HMM PF00069. | 0.477 |
| ABK71056.1 | fhaB | MSMEG_0032 | MSMEG_0034 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | FHA domain protein; Regulates growth and cell division. Probably required for divisomal protein assembly under oxidative stress. | 0.951 |
| ABK71056.1 | pbpA | MSMEG_0032 | MSMEG_0031 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Penicillin binding protein transpeptidase domain protein; Cell wall formation. Plays an important role in cell division and cell shape maintenance by cross-linking adjacent peptidoglycan chains through transpeptidation. | 0.999 |
| ABK71056.1 | pknA | MSMEG_0032 | MSMEG_0030 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Serine/threonine protein kinase PknA; Identified by match to protein family HMM PF00069. | 0.973 |
| ABK71056.1 | pknB | MSMEG_0032 | MSMEG_0028 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.978 |
| ABK71684.1 | ABK71056.1 | MSMEG_4366 | MSMEG_0032 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | 0.480 |
| ABK71684.1 | ABK72306.1 | MSMEG_4366 | MSMEG_0033 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | 0.889 |
| ABK71684.1 | fhaB | MSMEG_4366 | MSMEG_0034 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | FHA domain protein; Regulates growth and cell division. Probably required for divisomal protein assembly under oxidative stress. | 0.608 |
| ABK71684.1 | pknB | MSMEG_4366 | MSMEG_0028 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.736 |
| ABK72306.1 | ABK70730.1 | MSMEG_0033 | MSMEG_2467 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Transketolase, central region; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780. | 0.957 |
| ABK72306.1 | ABK71056.1 | MSMEG_0033 | MSMEG_0032 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | 0.958 |
| ABK72306.1 | ABK71684.1 | MSMEG_0033 | MSMEG_4366 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | 0.889 |
| ABK72306.1 | ABK74362.1 | MSMEG_0033 | MSMEG_4243 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Serine/threonine-protein kinase PK-1; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163. | 0.906 |
| ABK72306.1 | ABK74946.1 | MSMEG_0033 | MSMEG_6206 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Serine/threonine protein kinase PksC; Identified by match to protein family HMM PF00069. | 0.888 |
| ABK72306.1 | fhaB | MSMEG_0033 | MSMEG_0034 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | FHA domain protein; Regulates growth and cell division. Probably required for divisomal protein assembly under oxidative stress. | 0.957 |
| ABK72306.1 | pbpA | MSMEG_0033 | MSMEG_0031 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Penicillin binding protein transpeptidase domain protein; Cell wall formation. Plays an important role in cell division and cell shape maintenance by cross-linking adjacent peptidoglycan chains through transpeptidation. | 0.969 |
| ABK72306.1 | pknA | MSMEG_0033 | MSMEG_0030 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Serine/threonine protein kinase PknA; Identified by match to protein family HMM PF00069. | 0.994 |
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