STRINGSTRING
frgA frgA frgB frgB frgC frgC MXAN_6419 MXAN_6419 MXAN_4396 MXAN_4396 MXAN_0634 MXAN_0634 MXAN_1106 MXAN_1106 MXAN_1131 MXAN_1131 MXAN_5055 MXAN_5055 MXAN_5187 MXAN_5187 MXAN_6423 MXAN_6423
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frgAFrgA protein; Identified by similarity to GB:AAF18101.1; match to protein family HMM PF05157. (942 aa)    
Predicted Functional Partners:
frgB
Sensor histidine kinase FrgB; Identified by similarity to GB:AAF18102.1; match to protein family HMM PF00512; match to protein family HMM PF02518.
 
   
 0.952
frgC
Sigma-54 dependent DNA-binding response regulator FrgC; Identified by similarity to GB:AAF18103.1; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199.
     
 0.908
MXAN_6419
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.770
MXAN_4396
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.768
MXAN_0634
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.764
MXAN_1106
PT repeat/DnaJ domain/tetratricopeptide repeat protein; Identified by match to protein family HMM PF00226; match to protein family HMM PF00515; match to protein family HMM PF04886; match to protein family HMM PF07719.
  
   
 0.762
MXAN_1131
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.760
MXAN_5055
Conserved hypothetical protein.
  
     0.760
MXAN_5187
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.759
MXAN_6423
Putative membrane protein.
  
     0.759
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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