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relA relA gmk gmk MXAN_4741 MXAN_4741 pyk pyk pyk-2 pyk-2 MXAN_5759 MXAN_5759 MXAN_6322 MXAN_6322 ndk ndk MXAN_4256 MXAN_4256 MXAN_7396 MXAN_7396 MXAN_3956 MXAN_3956
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
relAGTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (753 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 
 0.929
MXAN_4741
Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444.
  
 
 0.923
pyk
Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family.
  
 
 0.921
pyk-2
Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family.
  
 
 0.921
MXAN_5759
Phosphatase, Ppx/GppA family; Identified by match to protein family HMM PF02541.
  
 
 0.919
MXAN_6322
Phosphatase, Ppx/GppA family; Identified by match to protein family HMM PF01966; match to protein family HMM PF02541.
  
 
 0.919
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.918
MXAN_4256
CHASE2 domain protein; Identified by match to protein family HMM PF05226.
  
 
  0.913
MXAN_7396
Response regulator/adenylate cyclase; Identified by similarity to SP:P40138; match to protein family HMM PF00072; match to protein family HMM PF00211.
     
 0.905
MXAN_3956
Putative adenylate cyclase; Identified by similarity to SP:P40137; match to protein family HMM PF00211; match to protein family HMM PF00498; match to protein family HMM PF01590.
    
 0.904
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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