Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BP1142 | trpS | BP1142 | BP1143 | Transposase for IS481 element. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.762 |
| argS | fusA-3 | BP0115 | BP3610 | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.727 |
| argS | ileS | BP0115 | BP1753 | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | 0.986 |
| argS | pheT | BP0115 | BP2573 | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | Similar to Escherichia coli phenylalanyl-tRNA synthetase beta chain PheT or B1713 SW:SYFB_ECOLI (P07395) (795 aa) fasta scores: E(): 3.9e-126, 45.735% id in 809 aa. | 0.865 |
| argS | purL | BP0115 | BP2668 | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.673 |
| argS | rpoC | BP0115 | BP0016 | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.785 |
| argS | serS | BP0115 | BP2470 | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.651 |
| argS | thrS | BP0115 | BP1497 | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr). | 0.841 |
| argS | trpS | BP0115 | BP1143 | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.851 |
| argS | valS | BP0115 | BP2203 | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.870 |
| fusA-3 | argS | BP3610 | BP0115 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | 0.727 |
| fusA-3 | ileS | BP3610 | BP1753 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | 0.708 |
| fusA-3 | pheT | BP3610 | BP2573 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | Similar to Escherichia coli phenylalanyl-tRNA synthetase beta chain PheT or B1713 SW:SYFB_ECOLI (P07395) (795 aa) fasta scores: E(): 3.9e-126, 45.735% id in 809 aa. | 0.556 |
| fusA-3 | purL | BP3610 | BP2668 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.483 |
| fusA-3 | rpoC | BP3610 | BP0016 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.990 |
| fusA-3 | serS | BP3610 | BP2470 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.511 |
| fusA-3 | thrS | BP3610 | BP1497 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr). | 0.813 |
| fusA-3 | trpS | BP3610 | BP1143 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.703 |
| fusA-3 | valS | BP3610 | BP2203 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.733 |
| ileS | argS | BP1753 | BP0115 | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arginyl-tRNA synthetase ArgS or Sa0564 TR:Q99W05 (EMBL:AP003131) (553 aa) fasta scores: E(): 9.9e-65, 40.603% id in 564 aa. | 0.986 |
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