STRINGSTRING
pufL pufL pufB pufB pufA pufA pufM pufM puhA puhA bchZ bchZ bchM bchM bchX bchX RPA4402 RPA4402 RPA1549 RPA1549 RPA1531 RPA1531
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pufLPhotosynthetic reaction center L subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. (277 aa)    
Predicted Functional Partners:
pufB
Light-harvesting complex 1 beta chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
 
 0.999
pufA
Light-harvesting complex 1 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
 
 0.999
pufM
Photosynthetic reaction center M protein; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
0.999
puhA
H subunit of photosynthetic reaction center complex; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.999
bchZ
Bacteriochlorophyllide reductase subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.966
bchM
Mg-protoporphyrin IX methyl transferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.953
bchX
Bacteriochlorophyllide reductase subunit BchX; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the NifH/BchL/ChlL family.
 
  
 0.946
RPA4402
Hypothetical protein.
   
 
 0.930
RPA1549
Possible photosynthetic complex assembly protein.
  
    0.916
RPA1531
Possible Bch2, light harvesting pigment Major Facilitator Family (MFS) transporter.
 
  
 0.892
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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