STRINGSTRING
AAZ61299.1 AAZ61299.1 AAZ60543.1 AAZ60543.1 AAZ65221.1 AAZ65221.1 murF murF ddl ddl AAZ61588.1 AAZ61588.1 AAZ61891.1 AAZ61891.1 AAZ61358.1 AAZ61358.1 AAZ62070.1 AAZ62070.1 AAZ64488.1 AAZ64488.1 radA radA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
AAZ61299.1Alanine racemase region; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (373 aa)    
Predicted Functional Partners:
AAZ60543.1
L-alanine dehydrogenase; Belongs to the AlaDH/PNT family.
  
 
 0.969
AAZ65221.1
L-alanine dehydrogenase; Belongs to the AlaDH/PNT family.
  
 
 0.969
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
   
 0.955
ddl
D-alanine--D-alanine ligase; Cell wall formation.
 
 
 0.946
AAZ61588.1
Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase.
    
 0.918
AAZ61891.1
Alanine racemase region; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 
0.902
AAZ61358.1
Aminotransferase.
    
 0.819
AAZ62070.1
Aminotransferase.
    
 0.819
AAZ64488.1
Aminotransferase, class V.
    
 0.816
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
 
    0.742
Your Current Organism:
Cupriavidus pinatubonensis
NCBI taxonomy Id: 264198
Other names: C. pinatubonensis JMP134, Cupriavidus necator JMP134, Cupriavidus pinatubonensis JMP134, Ralstonia eutropha JMP134, Ralstonia eutropha str. JMP134, Ralstonia eutropha strain JMP134, Ralstonia sp. JMP134, Wautersia eutropha JMP134
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