Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Moth_1488 | Moth_1748 | Moth_1488 | Moth_1748 | ATP dependent DNA ligase, central. | PHP-like protein. | 0.974 |
Moth_1488 | Moth_2082 | Moth_1488 | Moth_2082 | ATP dependent DNA ligase, central. | Conserved hypothetical protein. | 0.992 |
Moth_1488 | ku | Moth_1488 | Moth_1489 | ATP dependent DNA ligase, central. | DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.977 |
Moth_1488 | polA | Moth_1488 | Moth_1841 | ATP dependent DNA ligase, central. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.992 |
Moth_1748 | Moth_1488 | Moth_1748 | Moth_1488 | PHP-like protein. | ATP dependent DNA ligase, central. | 0.974 |
Moth_1748 | Moth_2082 | Moth_1748 | Moth_2082 | PHP-like protein. | Conserved hypothetical protein. | 0.423 |
Moth_1748 | polA | Moth_1748 | Moth_1841 | PHP-like protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.985 |
Moth_2082 | Moth_1488 | Moth_2082 | Moth_1488 | Conserved hypothetical protein. | ATP dependent DNA ligase, central. | 0.992 |
Moth_2082 | Moth_1748 | Moth_2082 | Moth_1748 | Conserved hypothetical protein. | PHP-like protein. | 0.423 |
Moth_2082 | ku | Moth_2082 | Moth_1489 | Conserved hypothetical protein. | DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.878 |
Moth_2082 | polA | Moth_2082 | Moth_1841 | Conserved hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.416 |
ku | Moth_1488 | Moth_1489 | Moth_1488 | DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | ATP dependent DNA ligase, central. | 0.977 |
ku | Moth_2082 | Moth_1489 | Moth_2082 | DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | Conserved hypothetical protein. | 0.878 |
polA | Moth_1488 | Moth_1841 | Moth_1488 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | ATP dependent DNA ligase, central. | 0.992 |
polA | Moth_1748 | Moth_1841 | Moth_1748 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | PHP-like protein. | 0.985 |
polA | Moth_2082 | Moth_1841 | Moth_2082 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Conserved hypothetical protein. | 0.416 |