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gadB gadB gltB gltB panC panC puuE puuE puuC puuC betB betB tauD tauD Rmet_1898 Rmet_1898 gdhA gdhA Rmet_3207 Rmet_3207 ansB-2 ansB-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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Coexpression
Experiments
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[Homology]
Score
gadBGlutamate decarboxylase B, PLP-dependent; Belongs to the group II decarboxylase family. (460 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit.
    
 0.936
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.933
puuE
GABA aminotransferase, PLP-dependent; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.931
puuC
gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent; Belongs to the aldehyde dehydrogenase family.
  
 0.925
betB
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.924
tauD
Taurine dioxygenase.
  
 
 0.915
Rmet_1898
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.914
gdhA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.913
Rmet_3207
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.913
ansB-2
Periplasmic L-asparaginase II; Belongs to the asparaginase 1 family.
   
 
 0.907
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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