STRINGSTRING
cbbL cbbL Bxe_B2452 Bxe_B2452 Bxe_B2449 Bxe_B2449 Bxe_A1577 Bxe_A1577 Bxe_C0917 Bxe_C0917 gph gph gph-2 gph-2 Bxe_A1064 Bxe_A1064 Bxe_B0441 Bxe_B0441 Bxe_B2451 Bxe_B2451 Bxe_B2478 Bxe_B2478
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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cbbLRibulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. (499 aa)    
Predicted Functional Partners:
Bxe_B2452
Ribulose 1,5-bisphosphate carboxylase small subunit.
 
 0.999
Bxe_B2449
Phosphoribulokinase.
 
 
 0.967
Bxe_A1577
Putative transferase, hexapeptide repeat.
    
 
 0.934
Bxe_C0917
Transferase, hexapeptide repeat protein.
    
 
 0.934
gph
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.926
gph-2
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.926
Bxe_A1064
Putative haloacid dehalogenase-like hydrolase.
    
 0.919
Bxe_B0441
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family.
  
  
 
0.902
Bxe_B2451
CbbX-like protein, putative AAA ATPase.
 
   
 0.895
Bxe_B2478
HAD-superfamily hydrolase, subfamily IA, variant3.
 
  
 0.848
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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