STRINGSTRING
Meso_2678 Meso_2678 Meso_2673 Meso_2673 Meso_2676 Meso_2676 Meso_2675 Meso_2675 glgB glgB Meso_2674 Meso_2674 Meso_2421 Meso_2421 glgE glgE Meso_2234 Meso_2234 Meso_3890 Meso_3890 Meso_3687 Meso_3687
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2678Trehalose synthase; KEGG: rsp:RSP_2446 putative trehalose synthase; TIGRFAM: trehalose synthase trehalose synthase-fused probable maltokinase; PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain. (1115 aa)    
Predicted Functional Partners:
Meso_2673
Maltooligosyl trehalose synthase; KEGG: stm:STM1559 putative glycosyl hydrolase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain.
 
 
 0.997
Meso_2676
Glycogen debranching enzyme GlgX; KEGG: rsp:RSP_2449 putative glycosyl hydrolase; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13-like alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; Belongs to the glycosyl hydrolase 13 family.
 
 
0.996
Meso_2675
Maltooligosyl trehalose hydrolase; KEGG: rsp:RSP_2450 putative alpha-amylase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain.
 
 
0.995
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.995
Meso_2674
TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; KEGG: rsp:RSP_2451 putative 4-alpha-glucanotransferase.
 
 
 0.994
Meso_2421
Maltooligosyl trehalose hydrolase; PFAM: glycoside hydrolase, family 13-like alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; KEGG: rba:RB548 1,4-alpha-glucan branching enzyme.
 
 
0.978
glgE
Alpha amylase, catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
 
 0.978
Meso_2234
TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; KEGG: eba:ebA6232 starch phosphorylase.
  
 0.970
Meso_3890
TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; KEGG: eba:ebA6232 starch phosphorylase.
  
 0.970
Meso_3687
PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; KEGG: rpa:RPA4759 glycosyl hydrolase, family 13.
 
0.968
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.