Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rru_A0299 | Rru_A1958 | Rru_A0299 | Rru_A1958 | Glutamine amidotransferase class-I. | GMP reductase. | 0.958 |
Rru_A0299 | Rru_A1963 | Rru_A0299 | Rru_A1963 | Glutamine amidotransferase class-I. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.737 |
Rru_A0299 | Rru_A2483 | Rru_A0299 | Rru_A2483 | Glutamine amidotransferase class-I. | 5'-Nucleotidase; Belongs to the 5'-nucleotidase family. | 0.963 |
Rru_A0299 | apt | Rru_A0299 | Rru_A0607 | Glutamine amidotransferase class-I. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.967 |
Rru_A0299 | gmk | Rru_A0299 | Rru_A0429 | Glutamine amidotransferase class-I. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.918 |
Rru_A0299 | guaA | Rru_A0299 | Rru_A0355 | Glutamine amidotransferase class-I. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.912 |
Rru_A0299 | purH | Rru_A0299 | Rru_A3655 | Glutamine amidotransferase class-I. | IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.765 |
Rru_A0716 | Rru_A1958 | Rru_A0716 | Rru_A1958 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | GMP reductase. | 0.664 |
Rru_A0716 | Rru_A1963 | Rru_A0716 | Rru_A1963 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.904 |
Rru_A0716 | Rru_A2483 | Rru_A0716 | Rru_A2483 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 5'-Nucleotidase; Belongs to the 5'-nucleotidase family. | 0.910 |
Rru_A0716 | apt | Rru_A0716 | Rru_A0607 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.944 |
Rru_A0716 | guaA | Rru_A0716 | Rru_A0355 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.863 |
Rru_A0716 | purH | Rru_A0716 | Rru_A3655 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.990 |
Rru_A0766 | Rru_A1958 | Rru_A0766 | Rru_A1958 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | GMP reductase. | 0.762 |
Rru_A0766 | Rru_A2483 | Rru_A0766 | Rru_A2483 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | 5'-Nucleotidase; Belongs to the 5'-nucleotidase family. | 0.640 |
Rru_A0766 | apt | Rru_A0766 | Rru_A0607 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.975 |
Rru_A0766 | guaA | Rru_A0766 | Rru_A0355 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.661 |
Rru_A0766 | mtnP | Rru_A0766 | Rru_A0361 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.483 |
Rru_A1958 | Rru_A0299 | Rru_A1958 | Rru_A0299 | GMP reductase. | Glutamine amidotransferase class-I. | 0.958 |
Rru_A1958 | Rru_A0716 | Rru_A1958 | Rru_A0716 | GMP reductase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.664 |
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