Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rru_A0555 | Rru_A1008 | Rru_A0555 | Rru_A1008 | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | ADP-ribosyl-(dinitrogen reductase) hydrolase. | 0.960 |
Rru_A1007 | Rru_A1008 | Rru_A1007 | Rru_A1008 | Nitrogenase-associated protein; Belongs to the ArsC family. | ADP-ribosyl-(dinitrogen reductase) hydrolase. | 0.943 |
Rru_A1007 | Rru_A1009 | Rru_A1007 | Rru_A1009 | Nitrogenase-associated protein; Belongs to the ArsC family. | NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase. | 0.853 |
Rru_A1007 | Rru_A1389 | Rru_A1007 | Rru_A1389 | Nitrogenase-associated protein; Belongs to the ArsC family. | NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase. | 0.658 |
Rru_A1007 | Rru_A1916 | Rru_A1007 | Rru_A1916 | Nitrogenase-associated protein; Belongs to the ArsC family. | Ferredoxin. | 0.711 |
Rru_A1007 | Rru_A2281 | Rru_A1007 | Rru_A2281 | Nitrogenase-associated protein; Belongs to the ArsC family. | NifQ. | 0.737 |
Rru_A1007 | Rru_A2282 | Rru_A1007 | Rru_A2282 | Nitrogenase-associated protein; Belongs to the ArsC family. | 4Fe-4S ferredoxin, iron-sulfur binding. | 0.752 |
Rru_A1007 | Rru_A2284 | Rru_A1007 | Rru_A2284 | Nitrogenase-associated protein; Belongs to the ArsC family. | Dinitrogenase iron-molybdenum cofactor biosynthesis. | 0.739 |
Rru_A1008 | Rru_A0555 | Rru_A1008 | Rru_A0555 | ADP-ribosyl-(dinitrogen reductase) hydrolase. | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.960 |
Rru_A1008 | Rru_A1007 | Rru_A1008 | Rru_A1007 | ADP-ribosyl-(dinitrogen reductase) hydrolase. | Nitrogenase-associated protein; Belongs to the ArsC family. | 0.943 |
Rru_A1008 | Rru_A1009 | Rru_A1008 | Rru_A1009 | ADP-ribosyl-(dinitrogen reductase) hydrolase. | NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase. | 0.933 |
Rru_A1008 | Rru_A1130 | Rru_A1008 | Rru_A1130 | ADP-ribosyl-(dinitrogen reductase) hydrolase. | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.960 |
Rru_A1008 | Rru_A1389 | Rru_A1008 | Rru_A1389 | ADP-ribosyl-(dinitrogen reductase) hydrolase. | NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase. | 0.804 |
Rru_A1008 | Rru_A1916 | Rru_A1008 | Rru_A1916 | ADP-ribosyl-(dinitrogen reductase) hydrolase. | Ferredoxin. | 0.427 |
Rru_A1008 | Rru_A2281 | Rru_A1008 | Rru_A2281 | ADP-ribosyl-(dinitrogen reductase) hydrolase. | NifQ. | 0.659 |
Rru_A1008 | Rru_A2282 | Rru_A1008 | Rru_A2282 | ADP-ribosyl-(dinitrogen reductase) hydrolase. | 4Fe-4S ferredoxin, iron-sulfur binding. | 0.576 |
Rru_A1008 | Rru_A2284 | Rru_A1008 | Rru_A2284 | ADP-ribosyl-(dinitrogen reductase) hydrolase. | Dinitrogenase iron-molybdenum cofactor biosynthesis. | 0.480 |
Rru_A1008 | glnB | Rru_A1008 | Rru_A2085 | ADP-ribosyl-(dinitrogen reductase) hydrolase. | Nitrogen regulatory protein P-II (GlnB, GlnK); P-II indirectly controls the transcription of the glutamine synthetase gene (glnA). P-II prevents NR-II-catalyzed conversion of NR- I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is uridylylated to P-II-UMP, these events are reversed. When the ratio of Gln to 2-ketoglutarate decreases, P-II is uridylylated to P-II-UMP, which causes the deadenylation of glutamine synthetase, so activating the enzyme; Belongs to the P(II) protein family. | 0.788 |
Rru_A1009 | Rru_A1007 | Rru_A1009 | Rru_A1007 | NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase. | Nitrogenase-associated protein; Belongs to the ArsC family. | 0.853 |
Rru_A1009 | Rru_A1008 | Rru_A1009 | Rru_A1008 | NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase. | ADP-ribosyl-(dinitrogen reductase) hydrolase. | 0.933 |
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