STRINGSTRING
Tfu_0484 Tfu_0484 Tfu_0013 Tfu_0013 Tfu_0483 Tfu_0483 Tfu_0485 Tfu_0485 Tfu_0331 Tfu_0331 Tfu_0870 Tfu_0870 Tfu_1268 Tfu_1268 Tfu_1250 Tfu_1250
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_0484Streptogrisin C. Serine peptidase. MEROPS family S01A. (368 aa)    
Predicted Functional Partners:
Tfu_0013
Putative integral membrane protein.
  
   
 0.565
Tfu_0483
Conserved hypothetical protein.
       0.524
Tfu_0485
Putative peptidase.
       0.428
Tfu_0331
Hypothetical protein.
  
   0.424
Tfu_0870
Hypothetical protein.
 
   
 0.423
Tfu_1268
Putative secreted cellulose-binding protein.
  
     0.406
Tfu_1250
Conserved hypothetical protein.
  
     0.405
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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