Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tfu_0297 | Tfu_0601 | Protein phosphatase 2C-like. | Serine/threonine protein kinase. | 0.736 |
Tfu_0297 | Tfu_1041 | Protein phosphatase 2C-like. | Tyrosine protein kinase:Serine/threonine protein kinase:PASTA. | 0.955 |
Tfu_0297 | Tfu_1084 | Protein phosphatase 2C-like. | Serine/threonine protein kinase. | 0.804 |
Tfu_0297 | Tfu_1395 | Protein phosphatase 2C-like. | Forkhead-associated. | 0.460 |
Tfu_0297 | Tfu_2361 | Protein phosphatase 2C-like. | Tyrosine protein kinase:Serine/threonine protein kinase. | 0.836 |
Tfu_0297 | Tfu_3060 | Protein phosphatase 2C-like. | FHA domain protein. | 0.688 |
Tfu_0601 | Tfu_0297 | Serine/threonine protein kinase. | Protein phosphatase 2C-like. | 0.736 |
Tfu_0601 | Tfu_1041 | Serine/threonine protein kinase. | Tyrosine protein kinase:Serine/threonine protein kinase:PASTA. | 0.795 |
Tfu_0601 | Tfu_1084 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.580 |
Tfu_0601 | Tfu_1395 | Serine/threonine protein kinase. | Forkhead-associated. | 0.415 |
Tfu_0601 | Tfu_2361 | Serine/threonine protein kinase. | Tyrosine protein kinase:Serine/threonine protein kinase. | 0.771 |
Tfu_0601 | Tfu_3060 | Serine/threonine protein kinase. | FHA domain protein. | 0.507 |
Tfu_0601 | Tfu_3062 | Serine/threonine protein kinase. | Protein phosphatase 2C-like. | 0.765 |
Tfu_0757 | Tfu_0758 | Regulatory protein, LuxR:TPR repeat. | Regulatory protein, LuxR. | 0.594 |
Tfu_0757 | Tfu_1195 | Regulatory protein, LuxR:TPR repeat. | Putative regulator. | 0.488 |
Tfu_0757 | Tfu_2361 | Regulatory protein, LuxR:TPR repeat. | Tyrosine protein kinase:Serine/threonine protein kinase. | 0.760 |
Tfu_0758 | Tfu_0757 | Regulatory protein, LuxR. | Regulatory protein, LuxR:TPR repeat. | 0.594 |
Tfu_0758 | Tfu_1195 | Regulatory protein, LuxR. | Putative regulator. | 0.493 |
Tfu_0758 | Tfu_2361 | Regulatory protein, LuxR. | Tyrosine protein kinase:Serine/threonine protein kinase. | 0.680 |
Tfu_1041 | Tfu_0297 | Tyrosine protein kinase:Serine/threonine protein kinase:PASTA. | Protein phosphatase 2C-like. | 0.955 |
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