Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE_0554.1 | prf1 | APE_0554.1 | APE_1988.1 | Putative methyltransferase. | Peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. Belongs to the eukaryotic release factor 1 family. | 0.849 |
| APE_1119.1 | aif2a | APE_1119.1 | APE_0436.1 | ABCE1 homolog. | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | 0.931 |
| APE_1119.1 | aif2b | APE_1119.1 | APE_1533.1 | ABCE1 homolog. | Translation initiation factor 2 beta subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-beta/eIF-5 family. | 0.862 |
| APE_1119.1 | aif2g | APE_1119.1 | APE_2366.1 | ABCE1 homolog. | Translation initiation factor 2 gamma subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | 0.891 |
| APE_1119.1 | prf1 | APE_1119.1 | APE_1988.1 | ABCE1 homolog. | Peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. Belongs to the eukaryotic release factor 1 family. | 0.990 |
| APE_1119.1 | rpl15e | APE_1119.1 | APE_1452 | ABCE1 homolog. | 50S ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.726 |
| APE_1119.1 | rpl24p | APE_1119.1 | APE_0358 | ABCE1 homolog. | 50S ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.467 |
| APE_1119.1 | rplP0 | APE_1119.1 | APE_2171.1 | ABCE1 homolog. | 50S ribosomal protein P0; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.870 |
| APE_1119.1 | rps3ae | APE_1119.1 | APE_1154.1 | ABCE1 homolog. | 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.894 |
| aif2a | APE_1119.1 | APE_0436.1 | APE_1119.1 | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | ABCE1 homolog. | 0.931 |
| aif2a | aif2b | APE_0436.1 | APE_1533.1 | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | Translation initiation factor 2 beta subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-beta/eIF-5 family. | 0.999 |
| aif2a | aif2g | APE_0436.1 | APE_2366.1 | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | Translation initiation factor 2 gamma subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | 0.999 |
| aif2a | prf1 | APE_0436.1 | APE_1988.1 | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | Peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. Belongs to the eukaryotic release factor 1 family. | 0.872 |
| aif2a | rpl15e | APE_0436.1 | APE_1452 | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | 50S ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.893 |
| aif2a | rpl24p | APE_0436.1 | APE_0358 | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | 50S ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.639 |
| aif2a | rplP0 | APE_0436.1 | APE_2171.1 | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | 50S ribosomal protein P0; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.814 |
| aif2a | rps3ae | APE_0436.1 | APE_1154.1 | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.998 |
| aif2a | tuf | APE_0436.1 | APE_1844 | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.764 |
| aif2b | APE_1119.1 | APE_1533.1 | APE_1119.1 | Translation initiation factor 2 beta subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-beta/eIF-5 family. | ABCE1 homolog. | 0.862 |
| aif2b | aif2a | APE_1533.1 | APE_0436.1 | Translation initiation factor 2 beta subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-beta/eIF-5 family. | Translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-alpha family. | 0.999 |
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