Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CA_C2229 | CA_C2499 | CA_C2229 | CA_C2499 | Pyruvate:ferredoxin oxidoreductase. | Pyruvate ferredoxin oxidoreductase. | 0.999 |
CA_C2229 | acyP | CA_C2229 | CA_C2830 | Pyruvate:ferredoxin oxidoreductase. | Acylphosphatases, ACYP. | 0.446 |
CA_C2229 | askA | CA_C2229 | CA_C1743 | Pyruvate:ferredoxin oxidoreductase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.857 |
CA_C2229 | bcd | CA_C2229 | CA_C2711 | Pyruvate:ferredoxin oxidoreductase. | Butyryl-CoA dehydrogenase; Belongs to the acyl-CoA dehydrogenase family. | 0.922 |
CA_C2229 | crt | CA_C2229 | CA_C2712 | Pyruvate:ferredoxin oxidoreductase. | Crotonase (3-hydroxybutyryl-COA dehydratase); Catalyzes the reversible hydration of crotonyl-CoA. Can also use hexenoyl-CoA but not higher analogs. | 0.650 |
CA_C2229 | hbd | CA_C2229 | CA_C2708 | Pyruvate:ferredoxin oxidoreductase. | Beta-hydroxybutyryl-CoA dehydrogenase, NAD-dependent; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.518 |
CA_C2229 | ldh1 | CA_C2229 | CA_C0267 | Pyruvate:ferredoxin oxidoreductase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.997 |
CA_C2229 | pta | CA_C2229 | CA_C1742 | Pyruvate:ferredoxin oxidoreductase. | Phosphotransacetylase. | 0.985 |
CA_C2229 | ptb | CA_C2229 | CA_C3076 | Pyruvate:ferredoxin oxidoreductase. | Phosphate butyryltransferase; Catalyzes the conversion of butyryl-CoA through butyryl phosphate to butyrate. | 0.832 |
CA_C2229 | thlA | CA_C2229 | CA_C2873 | Pyruvate:ferredoxin oxidoreductase. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.965 |
CA_C2499 | CA_C2229 | CA_C2499 | CA_C2229 | Pyruvate ferredoxin oxidoreductase. | Pyruvate:ferredoxin oxidoreductase. | 0.999 |
CA_C2499 | acyP | CA_C2499 | CA_C2830 | Pyruvate ferredoxin oxidoreductase. | Acylphosphatases, ACYP. | 0.446 |
CA_C2499 | askA | CA_C2499 | CA_C1743 | Pyruvate ferredoxin oxidoreductase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.928 |
CA_C2499 | bcd | CA_C2499 | CA_C2711 | Pyruvate ferredoxin oxidoreductase. | Butyryl-CoA dehydrogenase; Belongs to the acyl-CoA dehydrogenase family. | 0.946 |
CA_C2499 | crt | CA_C2499 | CA_C2712 | Pyruvate ferredoxin oxidoreductase. | Crotonase (3-hydroxybutyryl-COA dehydratase); Catalyzes the reversible hydration of crotonyl-CoA. Can also use hexenoyl-CoA but not higher analogs. | 0.796 |
CA_C2499 | hbd | CA_C2499 | CA_C2708 | Pyruvate ferredoxin oxidoreductase. | Beta-hydroxybutyryl-CoA dehydrogenase, NAD-dependent; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.666 |
CA_C2499 | ldh1 | CA_C2499 | CA_C0267 | Pyruvate ferredoxin oxidoreductase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.996 |
CA_C2499 | pta | CA_C2499 | CA_C1742 | Pyruvate ferredoxin oxidoreductase. | Phosphotransacetylase. | 0.991 |
CA_C2499 | ptb | CA_C2499 | CA_C3076 | Pyruvate ferredoxin oxidoreductase. | Phosphate butyryltransferase; Catalyzes the conversion of butyryl-CoA through butyryl phosphate to butyrate. | 0.901 |
CA_C2499 | thlA | CA_C2499 | CA_C2873 | Pyruvate ferredoxin oxidoreductase. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.975 |
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