STRINGSTRING
rrnAC2519 rrnAC2519 tiaS tiaS rrnAC1064 rrnAC1064 rrnAC1820 rrnAC1820 rrnAC2745 rrnAC2745 rrnAC3263 rrnAC3263 tgt-2 tgt-2 rrnAC1135 rrnAC1135 nmd3 nmd3 rrnAC1439 rrnAC1439 mptD mptD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC2519Putative DNA binding protein. (322 aa)    
Predicted Functional Partners:
tiaS
Unknown; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
 
     0.842
rrnAC1064
Unknown; Belongs to the UPF0179 family.
  
     0.731
rrnAC1820
Unknown.
 
     0.727
rrnAC2745
Unknown.
 
     0.713
rrnAC3263
Unknown.
  
     0.707
tgt-2
Archaeosine tRNA-ribosyltransferase.
  
     0.704
rrnAC1135
Unknown.
  
     0.698
nmd3
Putative nonsense mediated mRNA decay protein.
  
   
 0.691
rrnAC1439
Unknown.
  
     0.688
mptD
Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family.
  
     0.685
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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