Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
mptD | nmd3 | rrnAC2306 | rrnAC2903 | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | Putative nonsense mediated mRNA decay protein. | 0.527 |
mptD | rrnAC1064 | rrnAC2306 | rrnAC1064 | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | Unknown; Belongs to the UPF0179 family. | 0.732 |
mptD | rrnAC1135 | rrnAC2306 | rrnAC1135 | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | Unknown. | 0.528 |
mptD | rrnAC1439 | rrnAC2306 | rrnAC1439 | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | Unknown. | 0.607 |
mptD | rrnAC1820 | rrnAC2306 | rrnAC1820 | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | Unknown. | 0.655 |
mptD | rrnAC2519 | rrnAC2306 | rrnAC2519 | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | Putative DNA binding protein. | 0.685 |
mptD | rrnAC2745 | rrnAC2306 | rrnAC2745 | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | Unknown. | 0.551 |
mptD | rrnAC3263 | rrnAC2306 | rrnAC3263 | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | Unknown. | 0.677 |
mptD | tgt-2 | rrnAC2306 | rrnAC3261 | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | Archaeosine tRNA-ribosyltransferase. | 0.551 |
nmd3 | mptD | rrnAC2903 | rrnAC2306 | Putative nonsense mediated mRNA decay protein. | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | 0.527 |
nmd3 | rrnAC1064 | rrnAC2903 | rrnAC1064 | Putative nonsense mediated mRNA decay protein. | Unknown; Belongs to the UPF0179 family. | 0.626 |
nmd3 | rrnAC1135 | rrnAC2903 | rrnAC1135 | Putative nonsense mediated mRNA decay protein. | Unknown. | 0.732 |
nmd3 | rrnAC1439 | rrnAC2903 | rrnAC1439 | Putative nonsense mediated mRNA decay protein. | Unknown. | 0.531 |
nmd3 | rrnAC1820 | rrnAC2903 | rrnAC1820 | Putative nonsense mediated mRNA decay protein. | Unknown. | 0.644 |
nmd3 | rrnAC2519 | rrnAC2903 | rrnAC2519 | Putative nonsense mediated mRNA decay protein. | Putative DNA binding protein. | 0.691 |
nmd3 | rrnAC2745 | rrnAC2903 | rrnAC2745 | Putative nonsense mediated mRNA decay protein. | Unknown. | 0.467 |
nmd3 | rrnAC3263 | rrnAC2903 | rrnAC3263 | Putative nonsense mediated mRNA decay protein. | Unknown. | 0.653 |
nmd3 | tgt-2 | rrnAC2903 | rrnAC3261 | Putative nonsense mediated mRNA decay protein. | Archaeosine tRNA-ribosyltransferase. | 0.739 |
rrnAC1064 | mptD | rrnAC1064 | rrnAC2306 | Unknown; Belongs to the UPF0179 family. | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | 0.732 |
rrnAC1064 | nmd3 | rrnAC1064 | rrnAC2903 | Unknown; Belongs to the UPF0179 family. | Putative nonsense mediated mRNA decay protein. | 0.626 |
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