Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MSC_0033 | sau96I-like | MSC_0033 | MSC_0215 | Predicted permease. | Type II site-specific deoxyribonuclease (Sau96I-li. | 0.423 |
| MSC_0219 | dcm | MSC_0219 | MSC_0216 | DNA METHYLASE. | Cytosine-specific DNA-methyltransferase Sau96I; Deleted EC_number 2.1.1.73. | 0.783 |
| MSC_0219 | gmk | MSC_0219 | MSC_0218 | DNA METHYLASE. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.864 |
| MSC_0219 | MSC_0219 | MSC_0220 | DNA METHYLASE. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.695 | |
| MSC_0219 | sau96I-like | MSC_0219 | MSC_0215 | DNA METHYLASE. | Type II site-specific deoxyribonuclease (Sau96I-li. | 0.773 |
| MSC_0219 | sun | MSC_0219 | MSC_0217 | DNA METHYLASE. | Sun family protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.893 |
| dcm | MSC_0219 | MSC_0216 | MSC_0219 | Cytosine-specific DNA-methyltransferase Sau96I; Deleted EC_number 2.1.1.73. | DNA METHYLASE. | 0.783 |
| dcm | gmk | MSC_0216 | MSC_0218 | Cytosine-specific DNA-methyltransferase Sau96I; Deleted EC_number 2.1.1.73. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.790 |
| dcm | MSC_0216 | MSC_0220 | Cytosine-specific DNA-methyltransferase Sau96I; Deleted EC_number 2.1.1.73. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.608 | |
| dcm | sau96I-like | MSC_0216 | MSC_0215 | Cytosine-specific DNA-methyltransferase Sau96I; Deleted EC_number 2.1.1.73. | Type II site-specific deoxyribonuclease (Sau96I-li. | 0.997 |
| dcm | sun | MSC_0216 | MSC_0217 | Cytosine-specific DNA-methyltransferase Sau96I; Deleted EC_number 2.1.1.73. | Sun family protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.873 |
| gmk | MSC_0219 | MSC_0218 | MSC_0219 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | DNA METHYLASE. | 0.864 |
| gmk | dcm | MSC_0218 | MSC_0216 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Cytosine-specific DNA-methyltransferase Sau96I; Deleted EC_number 2.1.1.73. | 0.790 |
| gmk | MSC_0218 | MSC_0220 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.738 | |
| gmk | sau96I-like | MSC_0218 | MSC_0215 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Type II site-specific deoxyribonuclease (Sau96I-li. | 0.773 |
| gmk | sun | MSC_0218 | MSC_0217 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Sun family protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.909 |
| MSC_0219 | MSC_0220 | MSC_0219 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | DNA METHYLASE. | 0.695 | |
| dcm | MSC_0220 | MSC_0216 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Cytosine-specific DNA-methyltransferase Sau96I; Deleted EC_number 2.1.1.73. | 0.608 | |
| gmk | MSC_0220 | MSC_0218 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.738 | |
| sau96I-like | MSC_0220 | MSC_0215 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Type II site-specific deoxyribonuclease (Sau96I-li. | 0.558 |
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