Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PM0560 | PM0562 | PM0560 | PM0562 | Unknown. | Unknown. | 0.978 |
PM0560 | bamA | PM0560 | PM1992 | Unknown. | Unknown; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.722 |
PM0560 | bamD | PM0560 | PM1720 | Unknown. | Unknown; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.467 |
PM0560 | exbB | PM0560 | PM1186 | Unknown. | ExbB. | 0.484 |
PM0560 | pal | PM0560 | PM0966 | Unknown. | Unknown; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.764 |
PM0560 | tolB | PM0560 | PM0967 | Unknown. | TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.537 |
PM0560 | tolQ | PM0560 | PM0970 | Unknown. | TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.708 |
PM0560 | tolR | PM0560 | PM0969 | Unknown. | TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.589 |
PM0562 | PM0560 | PM0562 | PM0560 | Unknown. | Unknown. | 0.978 |
PM0562 | bamA | PM0562 | PM1992 | Unknown. | Unknown; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.728 |
PM0562 | bamD | PM0562 | PM1720 | Unknown. | Unknown; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.475 |
PM0562 | pal | PM0562 | PM0966 | Unknown. | Unknown; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.764 |
PM0562 | tolB | PM0562 | PM0967 | Unknown. | TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.579 |
PM0562 | tolQ | PM0562 | PM0970 | Unknown. | TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.690 |
PM0562 | tolR | PM0562 | PM0969 | Unknown. | TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.569 |
PM0903 | pal | PM0903 | PM0966 | Unknown. | Unknown; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.634 |
bamA | PM0560 | PM1992 | PM0560 | Unknown; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Unknown. | 0.722 |
bamA | PM0562 | PM1992 | PM0562 | Unknown; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Unknown. | 0.728 |
bamA | bamD | PM1992 | PM1720 | Unknown; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Unknown; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.997 |
bamA | exbB | PM1992 | PM1186 | Unknown; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | ExbB. | 0.478 |
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