STRINGSTRING
hypoth hypoth PAB2389 PAB2389 pyrH pyrH fbp fbp rfbC rfbC PAB2344 PAB2344 nuoI nuoI PAB0923 PAB0923 rps2P rps2P dapA dapA PAB1295 PAB1295
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
hypothuppS probable undecaprenyl pyrophosphate synthetase (EC 2.5.1.31); Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids. (264 aa)    
Predicted Functional Partners:
PAB2389
idsA-like multifunctional short chain isoprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.984
pyrH
pyrH uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
  
 0.857
fbp
Carbonic anhydrase/acetyltransferase, containing bacterial transferase hexapeptide repeat.
       0.856
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
     
 0.819
PAB2344
Hypothetical protein.
      
 0.730
nuoI
nuoI NADH dehydrogenase I, subunit I.
     
 0.720
PAB0923
Putative RNA methylase, UPF0020 family.
   
    0.717
rps2P
rps2P SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.
  
  
 0.710
dapA
dapA dihydrodipicolinate synthase; Belongs to the DapA family.
 
  
 0.694
PAB1295
Hypothetical protein.
      
 0.655
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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